| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5155 |
|---|
| Symbol | |
|---|
| ID | 8728921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6293999 |
|---|
| End bp | 6295024 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| Protein accession | YP_003389926 |
|---|
| Protein GI | 284039996 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000488857 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.202978 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAATT TACAAAGCCA CGTATCGCTC AAACCTTACA ATACATTCGG AATTGATGCC
AACGCGCGGT ATTGGGTTGA GATTAGTCAT GAGGAAGACC TCCATACCTT ACTTCAGTTA
ACTGAATTTA TTGATCAGCC CAAACTAATT CTGGGTGGAG GCAGCAACGT TCTGCTGCGT
CATGACTTCA GCGGGCTGGT CGTTAAAATT AATATTCAGG GTATTGAAGT TGTTCGTGAA
GACGACACCC ATGTTTATCT GACCGCCGGA GCGGGCGTTA GCTGGCACGA ACTGGTGCAG
TTTTGTGTCA GACAAGGCTA CGCGGGCATG GAGAACCTAT CCCTGATTCC TGGTACCGTT
GGGGCAGCCC CAATGCAGAA TATAGGTGCT TATGGTGTTG AGCTGGAGCA AGTGTTCGAA
TCGCTTACCG CCGTTCATAT ACGCACTGGT GAGCGAAAGA CGTTTACCCA TGCCGACTGT
GCGTTTGGGT ACCGCGAGAG TGTTTTCAAG CGGGAGTTAA AGGGCCAGTA CATCATCACA
AGTGTTACGT TTCAGCTCAA CAAGCAACCA ACGTTTCACA CGCGGTATGG CGCTATTCAG
GAAACACTGG CCGAAATGGG CGTATCAGAC GATTCCCTAT CCATCAAAGC CATTAGTGAA
GCCGTTATTC GTATCCGGCG AAGCAAACTA CCCGATCCGG CACAAATTGG CAATGCGGGG
AGCTTTTTCA AAAACCCAGA AATTCCCAAA GCCCAATTTG ATGCGCTAAA GACTGAATTT
CCAGACCTGC CAGGCTACCC GATGGGCGAC GATGTTGTGA AAATTCCGGC GGGCTGGCTC
ATTGAACAGG CTGGCTGGAA AGGCTACCGT TCCGGCGATG CGGGCGTTCA TACCAAACAG
GCGCTCGTAT TGGTCAACTA TGGTAATGCC ACCGGCGATG ATATTCTGGC GCTTGCCAAA
CAAATACAGG AATCTGTACA GGCCAAATTT GGTGTAACGA TTACGCCTGA GGTCAATGTA
ATTTAG
|
|---|
| Protein sequence | MLNLQSHVSL KPYNTFGIDA NARYWVEISH EEDLHTLLQL TEFIDQPKLI LGGGSNVLLR
HDFSGLVVKI NIQGIEVVRE DDTHVYLTAG AGVSWHELVQ FCVRQGYAGM ENLSLIPGTV
GAAPMQNIGA YGVELEQVFE SLTAVHIRTG ERKTFTHADC AFGYRESVFK RELKGQYIIT
SVTFQLNKQP TFHTRYGAIQ ETLAEMGVSD DSLSIKAISE AVIRIRRSKL PDPAQIGNAG
SFFKNPEIPK AQFDALKTEF PDLPGYPMGD DVVKIPAGWL IEQAGWKGYR SGDAGVHTKQ
ALVLVNYGNA TGDDILALAK QIQESVQAKF GVTITPEVNV I
|
|---|
| |