Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5125 |
Symbol | |
ID | 8728891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6267780 |
End bp | 6269306 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | ATP synthase F1, beta subunit |
Protein accession | YP_003389896 |
Protein GI | 284039966 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.196922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACGG CAACGGCAGT CAATACGGGT AAGATTACGC AAATAATCGG GCCGGTCGTG GACGTGAGTT TCGAGGGCGA AGGCTCGCGA ATTCCCGCCA TCCTGGACGC CCTCAAAGTA ACTAAAGCCA ACGGACAACA GGTAATCCTG GAAGTTCAGC AACACCTGGG CGAAGATCGT GTGCGGACTA TCGCGATGGA CTCGACGGAC GGTCTATACC GTGGTATAGA AGTTGTTGAC TTAGGGCATC AAATCACGAT GCCAACGGGT GAAGGCATCC GTGGTCGGCT TTTTAACGTT GTTGGCGAAG CCATTGACGG TATTCCACAA CCAACCACAA CCGGTGTTGG CCTGCCCATT CACCGTTCGG CACCTAAGTT CGAAGACCTG GCTACATCGA CCGAAGTACT GTTTACCGGT ATTAAAGTTA TTGACCTCCT GGAGCCTTAC GCCAAAGGCG GTAAAATTGG TCTCTTCGGT GGTGCTGGTG TTGGTAAAAC CGTATTGATT CAGGAATTGA TCAACAACAT CGCTAAAGCC TATGCGGGTC TGTCCGTATT TGCCGGTGTT GGTGAGCGTA CCCGTGAAGG AAATGACCTG CTGCGTGAAA TGATCGAAGC CGGCATTATC CGTTACGGCG ATGCCTTTAA ACATTCAATG GAAGAAGGTG GCTGGGATCT GACGAAAGTC GATCTTCAGG AAATGACAAA TAGCCAGGCT ACCTTCGTTT TCGGTCAGAT GAACGAGCCA CCGGGAGCAC GTGCCCGCGT AGCCCTGTCG GGTCTGACCA TTGCCGAGCA CTTCCGCGAT GGCGACGGTG AAGGCGAAGG CCGTGACATC CTGTTCTTCG TTGACAACAT TTTCCGGTTC ACCCAGGCGG GTTCGGAGGT ATCGGCTCTG CTGGGTCGTA TGCCGTCGGC CGTGGGTTAC CAGCCTACGC TGGCTACCGA AATGGGTGTC ATGCAGGAGC GGATCACGTC GACCAAGCGG GGTTCTATCA CTTCGGTACA GGCCGTTTAC GTACCTGCCG ATGACTTGAC TGACCCGGCT CCGGCTACAA CCTTTGCTCA CTTGGATGCT ACGACGGTAT TGAGCCGTAA AATCTCCGAG TTAGGTATCT ACCCTGCCGT AGACCCACTC GACTCTACGT CGCGGATTCT GTCGGCTGAG ATTCTTGGTG ACGAACACTA CAACACGGCT CAGCGCGTGA AAGAGATTCT GCAACGCTAC AAAGAATTGC AGGATATCAT CGCCATTCTG GGTCTGGAAG AATTATCGGA AGAAGACAAA CTGATCGTTA GCCGCGCCCG TCGCGTACAG CGCTTCCTGT CGCAGCCGTT CTTCGTGGCT GAGCAGTTCA CCGGTCTGAA AGGTGTACTT GTTCCGATCG AAGATACCAT CAAAGGCTTC AACGAAATCA TCGACGGTAA GTATGACCAC TTGCCTGAAG CAGCTTTCAA CCTGGTTGGA ACCATCGAAG ATGCCGTTGC CAAAGGTGAG CGTCTGCTGA AAGAGTCTGG CCAGTAA
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Protein sequence | MITATAVNTG KITQIIGPVV DVSFEGEGSR IPAILDALKV TKANGQQVIL EVQQHLGEDR VRTIAMDSTD GLYRGIEVVD LGHQITMPTG EGIRGRLFNV VGEAIDGIPQ PTTTGVGLPI HRSAPKFEDL ATSTEVLFTG IKVIDLLEPY AKGGKIGLFG GAGVGKTVLI QELINNIAKA YAGLSVFAGV GERTREGNDL LREMIEAGII RYGDAFKHSM EEGGWDLTKV DLQEMTNSQA TFVFGQMNEP PGARARVALS GLTIAEHFRD GDGEGEGRDI LFFVDNIFRF TQAGSEVSAL LGRMPSAVGY QPTLATEMGV MQERITSTKR GSITSVQAVY VPADDLTDPA PATTFAHLDA TTVLSRKISE LGIYPAVDPL DSTSRILSAE ILGDEHYNTA QRVKEILQRY KELQDIIAIL GLEELSEEDK LIVSRARRVQ RFLSQPFFVA EQFTGLKGVL VPIEDTIKGF NEIIDGKYDH LPEAAFNLVG TIEDAVAKGE RLLKESGQ
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