Gene Slin_5086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5086 
Symbol 
ID8728852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6222749 
End bp6223201 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content47% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003389860 
Protein GI284039930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00855008 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGCTT CATCTCCATT TTCGATTTTA CTGGTTGATG ATGACCCGCT TGTTGCCGAG 
GTGCTTACGC GTTCAGCCCG GCAGAACTTT CCTGAAGCCC TTATTCAAGT CAGGACAAGT
TATGCTGAAG CAGAGGCCTA CGTTGAAAGT CTCGAAGGGA AGGGGCCTAA ATTGATATTG
CTGGACATCG ATTTAAAAAT AGGGCCAGAC GGCTTTGCTT TTCTCGCTTA TCTGCGCAAT
CATCCACAGG CACGACTGCT ACCCGTGGTG ATGCTATCGT ATTACGACGA AACAGAGAAT
GTAGAAAAAG CTTTTTCTAT GGGAGCCTCA TTGTTTACAC GGAAGCCGTC TGTCTATTCA
GCCTGGCAGG CTTATGTACA GCAATTACGC CACTATTGGT TTGAAACGAT CACGGTACCT
ACCGTCTGGT TTAGCAAAAG GGCCACTAGT TAG
 
Protein sequence
MTASSPFSIL LVDDDPLVAE VLTRSARQNF PEALIQVRTS YAEAEAYVES LEGKGPKLIL 
LDIDLKIGPD GFAFLAYLRN HPQARLLPVV MLSYYDETEN VEKAFSMGAS LFTRKPSVYS
AWQAYVQQLR HYWFETITVP TVWFSKRATS