Gene Slin_5057 details

Gene Information

• Locus tag: Slin_5057
• ID: 8728822
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: -
• Start bp: 6163737
• End bp: 6167237
• Gene Length: 3501 bp
• Protein Length: 1166 aa
• Translation table: 11
• GC content: 53%
• Product: ASPIC/UnbV domain protein
• Protein accession: YP_003389831
• Protein GI: 284039901

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 0.279918
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCATCA GTTTACTAGT ACTGGCAATA GGCCTGATTG CCGGTTGCCG TTCAGAACAG 
CAACAACCGG CAGACCCGCT GTTCCGAAAA CTACCCGCCG AAGAAACCCA CGTTAATTTT 
AGTAATACCA TTACCGACGA CAAAGACTTT AACGTCTTCA ATTATCGCAA TTTCTACAAT 
GGCGGAGGAG TCGCTATCGG CGATGTAAAC AACGACGGCC TGTCAGACGT GTTGCTGATA 
GCCAATATGG GCGACAATAA ACTGTACCTG AACCGGACAG CGACGAGTAA AGCCGGGTCG 
GAACAGCCTG GAATTCAGTT TGAAGATGTT ACCGCCAAAG CGGGTGTGGC CGGTAAACGG 
GCCTGGAGTA CGGGCGCCAC CTTTGCCGAT GTAAACGGCG ATGGACGGCT GGATATCTAC 
ATTTGCAATG CCGGTAACCG CGACGGCGAC GACCGGGCCA ATGAACTCTT CATCAACAAC 
GGCAACGACG CCAGCGGTAT CCCCACGTTT ACCGAACGGG CAGCCGAATA TGGTCTCGAC 
GACCGGGGTT ATTCCACCCA TGCCGCTTTC TTCGACTACG ACCGCGACGG CGATCTGGAT 
ATGTACCTAC TCAACAACAG CTTCATGCCC GTTGGGAAAC TGCAATACGC TAACCTGCGG 
TCGCAACGCG ATTCGCTGGG GGGGCATAAG TTGTTTGAAA ATAGGAGCCA GGGGTATTCT 
TTGAGGAGCG AGGAGCGAGG AGCGAGAAGT GAGGAGCCGT CCGGTGGTGG TAGAAAAAAA 
GGGAGTGGGG AGAAAAAAGG GAAGACTTCG GGGCCGGTGT TTGTGGATGT GTCGGAGGAG 
GCTGGGATAT ATGGGAGTTT GATTGGCTTT GGGCTAGGGA TTACTATAGG TGATGTGAAC 
GATGATAACT GGCTCGATAT TTATATTTCC AACGACTTCT ACGAGCGTGA CTATCTCTAT 
ATCAACAACC ATGATGGCAC GTTTAAGGAG TCGATCAAGG AGTCGATGCC GCATACGAGT 
CTGTCGTCCA TGGGGGCCGA TGTTGCCGAT GTCAACAACG ACGGCCGTCT CGATATTTTC 
ATCACCGATA TGCTACCCGG CAACGACCGG CGGCTAAAAC GAACCTCCAG CTACGAAAGC 
CACGACCTGG AGCAGATTAA AGTGGGCCGG GATTTTCATT ACCAGTTCAT GCAGAATATG 
CTGCACCTGA ATCAGGGTAA TCAGCCGGGA AATGGTGGCT TGCCCGTTTT CAGCGACATC 
GCCCGCTTTG CCGGGGTGCA GGCCACCGAC TGGAGTTGGG GGGCGCTGCT GTTCGACATG 
GACAACGACG GCCAGAAAGA TATATTCGTA GCCAACGGCA TTGCTAAAGA CGTAACCGAT 
CAGGATTTCG TGAACTTCCT GGCCGACCGC GAAAACATGG CGCAGATTGC CCGGCAACGG 
GCCTTTAATT TTAAAGAGTT TCTGGACAAA GCTCCGTCGG AAGGCGTGCC GAATTACGCT 
TTTCACAACG ATGGAAATTT ACAGTTTACC AATAAAGCGT TCGATTGGGG ACTGTCGGAG 
CCCGATTTTT CCAACGGAGC TGCGTATGGT GATCTGGACA ATGATGGCGA TCTGGATTTG 
ATTGTCAACA ACATGAATGC GCCGGTAGCC ATTTACCAGA ACCAATCCGT CGAGAAGAAT 
AAGACTAATT ACCTGAAGAT AAAGCTGGAA GGCACCGGGA TGAACCGAAA TGCCATTGGT 
GCCCGCGTGT TTTTACACCA GCCCGGCCAG ACGCAGTTGC TTCAGCAGAT GCCGAACCGG 
GGCTTTGAGT CGTCGGTCGA CCTGAACCTG CTTTTTGGAT TGGGAGCCAG CCCTACCATT 
GATTCGCTGG TGGTTATCTG GCCGGACGAT AAAATGCAGA CGGTACGCAA GCCGAAAGCC 
AACCAGATGC TGACGCTTCG GCAGCAGGAT GCCAACCAGC TCTGGAAACC TGATCCAACT 
ACGCAAACGC CCGCTTTTCA GGACAATACG GGGACTTCTG GACTGAGCTA TCTGCATCAG 
GAAAGCGCCT TTGTCGACTA TAACCGGGAT GCTTTACTGA AGCAACAACT GTCGACCCAG 
GGCCCGGCAC TGGCAACCGG CGACGTGAAC GGCGACGGGC TTGACGATGT ATTCTTTGGT 
GGAGCCAGCG GCCACGCGGG CCACTTATTC GTGCAGCATA CCGCCGGTCG ATTTGTCGAT 
AAAACGCCCG CTGTTATGCG GCAGGATACG ACTTATGAAG CGGTCGACGC TGTTTTGTTC 
GACGCTGATG GCGATAAAGA CCTGGACCTG TACGTGGTAT CGGGAAGCAA CGAATTTGGC 
GAAGAAACCG ACGAACTGCT GGATCGTTTT TACCTCAACG ATGGCAAGGG AAATTTCACC 
CGCTCGGAAA CTGCGCTGCC CAATTTGAAA GCCAACGGCT CCTGCGTGGC GGCCGGTGAT 
TTCGACCGGG ATGGCGACAT TGACCTATTC ATCGGCTCCC GAATGATTCC CGGCCAGTAC 
GGTCGGGACC CGGCCAGTTA TTTACTTTCC AACGATGGCA CCGGGAATTT CAAGAACTAC 
ACCAAACGCT CGCTGGCCGA AGTAGAGCAG CTGGGCATGG TAACCGATGC CACCTGGGCC 
GACCTCAACG GCGATTCATA TCCCGAGCTG GTGGTGGTAA GCGATTGGGG ACCCGTGCGG 
GTATTCGAAA ACAAGCGGGG GAAACTGAGT CAAAACCCCG AATTCACCAT CAAAAACGCG 
CAGGGTGATG TCCTGAAAAC GAATGGCTGG TGGAACTGCG TAACCGCCGG TGACGCCGAC 
GGCGATGGCG ATCTGGATCT GGTGATCGGC AATCTGGGCA CGAATTCACG CATAAAAGCC 
AATCAGACAA TCCCCGCTGA ACTTTACACC GGCGATTTCG ACCATAACGG CACCGTTGAG 
CAAATCATCA ACTGCGCCGA CGAAACGGGT GAGTTATACC CAATGGTGCT GAAGCAGGAG 
TTGCAGAAAG CCATGCCGAC GATCAAAAAG AAATACGTGA AATACGTCGA CTACGCGGGC 
AAGAAAATCA CCGATGTGCT GGATGAGGAT CAGCGGAAGC AGGCGGTTGT CAAACAGGCA 
TTCATGGGCG AAACTGTCAT TCTGCTTAAC GATGGAAAGG GAAAACTAAC GTTGCAGCCT 
TTACCGGCCG AGGCTCAGTT TTCGCCCGTA TGTGGTGCCC TCTTCACCGA TTATGATCAC 
GATGGACACA CGGACCTGCT GCTGACCGGT AATTTTCTGG ATGTACTTCC CGAAATCGGG 
CGCTACGACG CGAGTTATGG CGTTACCCTG CACAACAAGG GAAAGGCGGC CAACGGCACC 
ATCCGGTACG AATCCGTCAA TCCGGCGGTA TCCGGCTTTT TCGTCCGTGG GCAGGTTCGG 
CACATCGCCC AACTAAAACA GGGGCAAATT ATTCTCGCCA AAAATAACGA CAAGGCACAA 
GTGTTTTCTT TAAAGAAGTG A 

 

Protein sequence

MRISLLVLAI GLIAGCRSEQ QQPADPLFRK LPAEETHVNF SNTITDDKDF NVFNYRNFYN 
GGGVAIGDVN NDGLSDVLLI ANMGDNKLYL NRTATSKAGS EQPGIQFEDV TAKAGVAGKR 
AWSTGATFAD VNGDGRLDIY ICNAGNRDGD DRANELFINN GNDASGIPTF TERAAEYGLD 
DRGYSTHAAF FDYDRDGDLD MYLLNNSFMP VGKLQYANLR SQRDSLGGHK LFENRSQGYS 
LRSEERGARS EEPSGGGRKK GSGEKKGKTS GPVFVDVSEE AGIYGSLIGF GLGITIGDVN 
DDNWLDIYIS NDFYERDYLY INNHDGTFKE SIKESMPHTS LSSMGADVAD VNNDGRLDIF 
ITDMLPGNDR RLKRTSSYES HDLEQIKVGR DFHYQFMQNM LHLNQGNQPG NGGLPVFSDI 
ARFAGVQATD WSWGALLFDM DNDGQKDIFV ANGIAKDVTD QDFVNFLADR ENMAQIARQR 
AFNFKEFLDK APSEGVPNYA FHNDGNLQFT NKAFDWGLSE PDFSNGAAYG DLDNDGDLDL 
IVNNMNAPVA IYQNQSVEKN KTNYLKIKLE GTGMNRNAIG ARVFLHQPGQ TQLLQQMPNR 
GFESSVDLNL LFGLGASPTI DSLVVIWPDD KMQTVRKPKA NQMLTLRQQD ANQLWKPDPT 
TQTPAFQDNT GTSGLSYLHQ ESAFVDYNRD ALLKQQLSTQ GPALATGDVN GDGLDDVFFG 
GASGHAGHLF VQHTAGRFVD KTPAVMRQDT TYEAVDAVLF DADGDKDLDL YVVSGSNEFG 
EETDELLDRF YLNDGKGNFT RSETALPNLK ANGSCVAAGD FDRDGDIDLF IGSRMIPGQY 
GRDPASYLLS NDGTGNFKNY TKRSLAEVEQ LGMVTDATWA DLNGDSYPEL VVVSDWGPVR 
VFENKRGKLS QNPEFTIKNA QGDVLKTNGW WNCVTAGDAD GDGDLDLVIG NLGTNSRIKA 
NQTIPAELYT GDFDHNGTVE QIINCADETG ELYPMVLKQE LQKAMPTIKK KYVKYVDYAG 
KKITDVLDED QRKQAVVKQA FMGETVILLN DGKGKLTLQP LPAEAQFSPV CGALFTDYDH 
DGHTDLLLTG NFLDVLPEIG RYDASYGVTL HNKGKAANGT IRYESVNPAV SGFFVRGQVR 
HIAQLKQGQI ILAKNNDKAQ VFSLKK