Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5056 |
Symbol | |
ID | 8728821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6160179 |
End bp | 6163520 |
Gene Length | 3342 bp |
Protein Length | 1113 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | ASPIC/UnbV domain protein |
Protein accession | YP_003389830 |
Protein GI | 284039900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.841506 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA TTCTTCTTTT TATCGGCGCA TTGGCGTTGA CGGGCTGTAA CTCCTTCAAA TCGGAAAAAC CCCTTTTCGA GTCGCTCGAT TCGACCCAAA CGGGCGTTGG GTTTGTTAAT AAGCTGGTGC CGACCGAAAA GCTCAACATT TTAGATTACC TCTATTTCTA CAATGGTGGG GGCGTTTCGG CGGGCGATAT AAACAACGAT GGCCTCACCG ATCTGTACTT CGTATCCAAT CAGGGAAAGA ATAAGCTGTA CCTCAACAAG GGAGATTTTA AGTTTGAAGA CATCACTGCC AAAGCGGGCG TCGAAGGATT TGCAGACTGG CAAACAGGCT CCACAATGGC CGATGTCAAC GGCGACGGTC TACTCGATAT TTACGTCTGC GCGGTGGGCA ATTTCCGGGG GCAGGAGGGC TCCAATGAAT TGTACATTAA TAACGGCGAC AATACCTTCA CCGAAAAAGC CGCTGATTAC GGACTGGACT TTACGGGTTT TTCGACCCAG GCCGCCTTCT TCGATTACGA CCATGATGGC GATCTGGATT GTTACCTGCT CAATCACGCT ATCCATACCT CCCGCAGTTA CGACCGCGTT TCTGCCCGAA ACTTACGCAA TAACGAATCG GGCGATTACC TGTACGAGAA CCAAAGCATA ACCAAATCCG GGCAAGCCCC TGCGGGTAAA ATCGCCCGGT TTCAGAACGT AAGTGAGCGG GCGGGTATCT TCGGCGCGGC AATGGGCTAC GGGCTGGGAG TTTCGGTCGC CGACCTGAAT AACGATGGGT GGGAAGATAT TTACGTCTCC AACGATTTCC ACGAAGACGA TTATTACTAC GTCAACAACC ACGACGGGAC CTTTACCGAA AGCGTAAAAA AAGCCTTTCA GCACACCAGC CGATTCTCTA TGGGAAACGA CATTGGCGAT GTGAATAATG ACGGTTTTGC CGATGTAGTC ACGCTCGACA TGTATCCCGA AGATGAAACA GTTGAGAAAT CGTCGCTGGG CGAAGATCCG CTGGATATTT ACACCTATAA ACTGGCGTAC GGCTACATGA ACCAGTACAG CCGGAACTGT CTGCAACTGA GTCTTTCGGG TAAAAAATTC ATGGACATCG GCGCGATGTC GGGGGTAGCC GCAACCGACT GGAGTTGGTC GCCGTTGCTG GCCGACTACG ACAACGATGG GATCAAAGAC CTGTTCATCA CGAACGGCAT TGTCCGGCGG CCTAATAACC TGGAGTACGT GAAGTTTGCC GCTGACGACT CATTGCGGTA TGCAATGGAA ACATCGAAAT CGCTCGATGA GCGGGCTACT AAACTCATGC CCGAAGGCAA AGTGCATAAT TACCTGTACC GGGGAACACC CTCGTTGCGG TTTGAGGATA AGTCGTCGGC CTGGGGTTTC GAACTGCCGA ATTACTCGAA CGGTTCCGCC TACGCCGACC TCGACAATGA CGGCGATCTG GATCTCATTA CCAACAACAT CAACGACCCG GCCAGTTTGT ACCGCAATGA AGCCACGACG TTGTTTCCCG AAAATACGCA CCTGACCGTT AAGCTCAAAG GCGATTCGCC CAACACATTT GGGGTAGGGG CAAAGGTGAT TTTGAAATAC GGCAAAGACA GTCTGCTGGT GCAGCAACTG ATGCCAACGC GGGGCTTCGA GTCGTCAGTG GCACCGGAGT TACTGTTTGG GTTGGGCAAG CGGGCCAGCA TTGACTCGCT GATCGTTATC TGGCCGAATC AGCAGATGGA GGTGCGTACC AACGTCAAAA CCAATCAGTC GATAATGCTG AAACAGGCGG ATGCCAAACT CGATGGTGCC GGGTTCGTTT ATACAAATCC GCCCATGCAG CCTTTGTTCG CCGATGTATC GACCGCCGAC TCAATTCCGT ACCAACACAA GGAAAATAAA GAGTATTTCG ATTTCGTGCG GGAGTCGCTG ATGCCGTTCA AAGTGTCGAC CGAGGGGCCG CATCTGGCCG TTGGGGATGT AAACGGCGAT GGACTGGACG ATATGTATGC CGGTGGGGCC AAGTGGCAGG CTGGTAGCTT ACTCGTGCAG CAAGCGAACG GAACGTTCAA ACCATCGGTA CAGGCCGACT TTAAGAAAGA CTCTGTTTAT GAAGACGTCG ACGCGGTTTT CTTCGATGCC GATGGCGACA AGGACCTGGA TTTATACGTC GTTTCGGGCG GTAACGAGTT TTATAACAAG ATGCCGGAGC AGTTCGACCG GCTCTACCTG AACGACGGCA AAGGAAGCTT TACGCGTTCG CCGAATGCGC TGCCTGCCAT GTACGATAAC AAAAGCTGCG TTCGTCCTTT CGACGTCGAT AACGACGGCG ACCTCGACTT GTTTGTGGGT GGGCGTGTAG TGGGCTTCGG CTACGGTAAA TCGCCTAATT CGTATTTGCT GGTCAACAAT GGCAAGGGTA CGTTTACAGA TCAGATTGAT AAGCTGGCAC CGGGCCTCCG AACGGTTGGT ATGGTTACCG ACGCCGTATG GGCCGATTAT GACGGTGATA AAGACCAGGA CCTGATCGTG TCGGGCGACT GGATGCCGAT TCGCATTTTC GCCAATGATA AAGGGAAATT CCAGGAAGTG AAATCCATTA CCGATACCCC GCTCAACGGC TTTTTTCAGC GCCTTATTGC CGCCGATTTC GACCGGGATG GTGATATTGA TCTGGTAGCT GGAAACATCG GCACAAACAC CAAGTTCCGC AAAACACCCG ATTCGCAGCT GCGGATGCTG GTAAAGGATG TAGACAATAA CCAGAGTATT GAGCAGATCA TTTCGTACAA TCGCGGAGAT GACTGGTACC CACTCGCCTT TAAAGACGAA CTGGGCAAGC AAATGCCGAG CATCATTAAC AAACGCTTTA CCGACTATGT CTCCTTCGCA GGGAAGCCGC TCGATGATGT TTTGACGGAT GAAGAACTGA AAGGAGCGGA TGAACTTACC GTTATCGAGT TTGCTTCGGT TTACCTGGAG AATAACGACG GTAAGTTTGT CGTGCATGAA CTGCCCATGA TGGCGCAGGT ATCGAAGTTA TTTGCCCTGC AGGCCATTGA CTTCGACCGG GATGGGGATC TGGATATACT GGGGGGAGGT AACTTTTACG GGGTCAGCAC CTATCAGGGT CGATACGATG CCAGTTACGG GCTGGTACTG CGGAATGATG GCAAAGGAAA CTTTAGTGCG CTGTCGCCCG TAGATTCCGG TTTCCTGCTC AATGGCGAGA TACGGGATAT TCGCCCCGTA CGTTCGGCTC AGGGCGTTCG CATCGTTGTA ACGCGGAACG ACGCTGGTAT GCAGGTATTC AAATCGCTGT AG
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Protein sequence | MNRILLFIGA LALTGCNSFK SEKPLFESLD STQTGVGFVN KLVPTEKLNI LDYLYFYNGG GVSAGDINND GLTDLYFVSN QGKNKLYLNK GDFKFEDITA KAGVEGFADW QTGSTMADVN GDGLLDIYVC AVGNFRGQEG SNELYINNGD NTFTEKAADY GLDFTGFSTQ AAFFDYDHDG DLDCYLLNHA IHTSRSYDRV SARNLRNNES GDYLYENQSI TKSGQAPAGK IARFQNVSER AGIFGAAMGY GLGVSVADLN NDGWEDIYVS NDFHEDDYYY VNNHDGTFTE SVKKAFQHTS RFSMGNDIGD VNNDGFADVV TLDMYPEDET VEKSSLGEDP LDIYTYKLAY GYMNQYSRNC LQLSLSGKKF MDIGAMSGVA ATDWSWSPLL ADYDNDGIKD LFITNGIVRR PNNLEYVKFA ADDSLRYAME TSKSLDERAT KLMPEGKVHN YLYRGTPSLR FEDKSSAWGF ELPNYSNGSA YADLDNDGDL DLITNNINDP ASLYRNEATT LFPENTHLTV KLKGDSPNTF GVGAKVILKY GKDSLLVQQL MPTRGFESSV APELLFGLGK RASIDSLIVI WPNQQMEVRT NVKTNQSIML KQADAKLDGA GFVYTNPPMQ PLFADVSTAD SIPYQHKENK EYFDFVRESL MPFKVSTEGP HLAVGDVNGD GLDDMYAGGA KWQAGSLLVQ QANGTFKPSV QADFKKDSVY EDVDAVFFDA DGDKDLDLYV VSGGNEFYNK MPEQFDRLYL NDGKGSFTRS PNALPAMYDN KSCVRPFDVD NDGDLDLFVG GRVVGFGYGK SPNSYLLVNN GKGTFTDQID KLAPGLRTVG MVTDAVWADY DGDKDQDLIV SGDWMPIRIF ANDKGKFQEV KSITDTPLNG FFQRLIAADF DRDGDIDLVA GNIGTNTKFR KTPDSQLRML VKDVDNNQSI EQIISYNRGD DWYPLAFKDE LGKQMPSIIN KRFTDYVSFA GKPLDDVLTD EELKGADELT VIEFASVYLE NNDGKFVVHE LPMMAQVSKL FALQAIDFDR DGDLDILGGG NFYGVSTYQG RYDASYGLVL RNDGKGNFSA LSPVDSGFLL NGEIRDIRPV RSAQGVRIVV TRNDAGMQVF KSL
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