Gene Slin_5009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5009 
Symbol 
ID8728773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6106730 
End bp6107488 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content52% 
IMG OID 
Productsuccinate dehydrogenase and fumarate reductase iron-sulfur protein 
Protein accessionYP_003389785 
Protein GI284039855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.854075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA ACCTAAAAGT CTGGAGACAG AAAAATAATA ATACGGCTGG TAAACTGGTT 
GACTACCAGC TGGATAATGT ATCGGAAGAT ATGTCTTTTC TGGAGATGTT CGACGTTTTG
AACGACTCGC TAACCCGGAA AGGCGAAGAT CCCGTTACGT TCGACCACGA CTGCCGCGAG
GGTATTTGCG GGATGTGCTC CATGTACATT AACGGTCGGG CGCATGGTCC ACAAACCGGC
GCAACCACCT GCCAGCTGCA CATGCGGTCG TTCAATGATG GCGACACCAT TGTGGTTGAA
CCCTGGCGCG CTCGGGCATT CCCCGTTATT AAAGACCTGA TGGTCGACCG GTCGGCTTTC
GACCGGATCA TTCAATCGGG TGGATACGTT TCTGTTAACA CGGGTTCGGC GCGTGATGCT
AATGAAATTC TGATTCCACG CACCGTTGCC GATGAAGCGA TGGATGCCGC TGCCTGTATT
GGTTGTGGTG CCTGCGTTGC TGCCTGTAAA AATGCGTCGG CTATGCTGTT CGTTTCGGCA
AAAGTGTCTC AACTGGCTAT TTTACCACAG GGGCAGTCGG AGCAGAAGGA GAGGGCTGAG
CGAATGGTAG CGCAGATGGA CGCCGAAGGA TTTGGTGCCT GCTCGTTCAC GGGTGCGTGC
TCGGTTGAAT GTCCGAAGTC AATTTCGCTT GATCACATTG CCCGTATGAA CCGGGAATAC
CTTGGTGCTA AACTGTCGTC GGATAACGTT CAGGGTTAA
 
Protein sequence
MKINLKVWRQ KNNNTAGKLV DYQLDNVSED MSFLEMFDVL NDSLTRKGED PVTFDHDCRE 
GICGMCSMYI NGRAHGPQTG ATTCQLHMRS FNDGDTIVVE PWRARAFPVI KDLMVDRSAF
DRIIQSGGYV SVNTGSARDA NEILIPRTVA DEAMDAAACI GCGACVAACK NASAMLFVSA
KVSQLAILPQ GQSEQKERAE RMVAQMDAEG FGACSFTGAC SVECPKSISL DHIARMNREY
LGAKLSSDNV QG