Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5005 |
Symbol | |
ID | 8728769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6098827 |
End bp | 6101220 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | alpha-1,2-mannosidase |
Protein accession | YP_003389781 |
Protein GI | 284039851 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAT CAACAATGCA TCGTCTTTTA GTACTGGCTG GCATTGCCAT CAGTCTGGTA TCAATACAGG TTGCAGAAGC CCAAAAGCAA CCCGTCGACC TCGTCAATCC GCTGGTTGAT GCGGCCAATT CGCGCTGGTT CTTTTTTAAC TCGGCTTCAC GACCCTTCGG CATGGTGAAC CTGAGCCCCG ATAACGGCAT CAATGCTGAC TGGGGCGCTG GCTACCGGTA TCATCAGGAC AGTATCAAGT GCTTTAGCCA TATCCACGGC TGGCAACTGT CTGGCGTGCC GGTGATGCCC ACAACGGGCG AGTTTAAAGG GCATTTGGGG GCCGAGCAGT ACGGATCTCG GTTTTCGCAT CAGAAAGAAA TCGTAAAAGC GGGTTACCAT AAAGTAGTGC TCGATGCTTA CAACATCATT GCCGAACTGA CGTCGACCAC GCGCGTTGGC TTTCACAAAT ACACGTACCC AGCTTCAGCC CAAAGTCATA TTCTGTTCGA TTTTTCCACC TTCCTGGGGC CGTCTGATAC CCAGAAAGGC TACGTAAAAA AGGTCAGCAA TCAGGAAATT GAAGGCTACG CGATCATGGC CCCCACCATT CGTCGGCCAA AAGTGCTGCC CGTTTATTTC GTCGCTGTTT TCGACAAACC GTTCGACTCG TTCAGGGGCT GGCGGAACGG AAAGCTGGAA ACGATCAGTG GCGTCATCGA AGGTGAACGT GTGGGAGCGT ACCTGAGCTT CAAAACTAAA GCGGGTGAGG TACGGAAGAT GAAAGTGGCC ATTTCGTACG TCAGCGAAGA ACAGGCCCGT ATCAACCTCA AGACCGAACT GTCGCACTGG GATTTCGAAA AAACCGTTCA GGATAGCCGC TCCGACTGGA ACAACTGGCT GAGCCGAATC GATGTGCAGG GCGGCAGCGA TACCACCCGG AGCCGCTTCT ACACCGACCT CTGGCACGCG CTACAGGGCC GACGCATCAT CTCCGACGTC AACGGAAAGT ACAGCGACAT GACCGGCCCC GAACGGCGCA TCAAACAGAT TCCGCTGGAT GCCAACGGCA AGCCCAAATT TAATCACCAC AACTCCGACT CGTTCTGGGG TGCCCAGTGG ACCATCAACA CGCTTTGGCA TCTGGTGTAC CCGGAGGTCA CCGAATCGTT TGTCAACTCG ATGGTGATGA TGTATCAGGA TGGCGGGCTC ATTCCCCGTG GACCGGCGGG GGGCAACTAC ACCTACGTGA TGACCGGTGC CTCGACCACG CCTTTCATTG TGAGTGCCTA CCTGAAGGGC ATCCGGGGCT TCGACACCGA AAAAGCCTAT GAGGGCCTGC GCAAGAACCA TTTTCCCGGC GGTATGATGA GCAAGGCGGG GTATGAACAC AACACGTTTA AGGGTGGGGG TATCGAATAC TATATGGAAC GGGGTTACGT GCCGCACCCA TTGAGTAAAA CCCGTTACGG CTTTCATCAG GACGGTTCGA CCCAAACGCT GGAATACGCC TACCAGGATT ACACGCTGGC GCAGATGGCT AAATCGCTCG GCAAAACCGA CGATTATAAC CTGTTTATGA AGCGGGCGCA GAACTACAAA AACGTCTGGA ATCCTGACTT GGGCTGGATG TGGAATCGCA CGCTGGACGG CAAATGGGCC GAGCCGGTGG ATATTCTGCG CTACGACAAC GGTTGGGAAG AGGGCAACGC GGCCCAGTAC ACCTGGTTTG TGCCGCATGA TGTGCAGGGG CTAATTACCC TCATGGGCGG TCGCGAGAAA TTTACGGCCA AACTGAATAG TTCTTTCGAG AAGGCGCAGA AGCATGATTA TGTGTCGGGC AAATCGCACG ATAATGAAAC CCTCGAAGAG CTGCGCCGGG TATTTCTCAA CTACGGCAAT CAGCCCAGTA TTCAAACGGC CCACCTCTTC AACTACGCGG GCGCACCCTG GCTGACGCAA TACTGGACGC GGCAGGTGAT CGAAAAAGTA TACAGCGGCC TCTCGCCCGA TTACGGCTAC AGTGGCGACG AAGATCAGGG ACTTATGGGA AGCTTGTCGG TACTGCTCAA AACGGGCCTC TTCTCGACCA ATGGCGGCAC TACGCCCGAG CCGTTCTACG AAATCAGCAG CCCGATTTTC GACAGGATCA CAATCAAACT CAATCCGAAA TATTACAAAG GAAAACAGTT CGTGATCGAC GCGAAGAACA ACTCGGCAGC GAACCTGTAC ATCCAATCGG CGCAATTGAA TGGTAAACCC CTCGACCGTC CCTGGATGCT GCACGAAACG GTGGTCAACG GCGGCACGCT GACGCTTCAA ATGGGTGCTC AACCGAATAA ATCGTGGGGC AACAAACCCG AGCAGGCACC GGTCTCGATG TCGTCGGAGG CTGCAAAACG CTAA
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Protein sequence | MNKSTMHRLL VLAGIAISLV SIQVAEAQKQ PVDLVNPLVD AANSRWFFFN SASRPFGMVN LSPDNGINAD WGAGYRYHQD SIKCFSHIHG WQLSGVPVMP TTGEFKGHLG AEQYGSRFSH QKEIVKAGYH KVVLDAYNII AELTSTTRVG FHKYTYPASA QSHILFDFST FLGPSDTQKG YVKKVSNQEI EGYAIMAPTI RRPKVLPVYF VAVFDKPFDS FRGWRNGKLE TISGVIEGER VGAYLSFKTK AGEVRKMKVA ISYVSEEQAR INLKTELSHW DFEKTVQDSR SDWNNWLSRI DVQGGSDTTR SRFYTDLWHA LQGRRIISDV NGKYSDMTGP ERRIKQIPLD ANGKPKFNHH NSDSFWGAQW TINTLWHLVY PEVTESFVNS MVMMYQDGGL IPRGPAGGNY TYVMTGASTT PFIVSAYLKG IRGFDTEKAY EGLRKNHFPG GMMSKAGYEH NTFKGGGIEY YMERGYVPHP LSKTRYGFHQ DGSTQTLEYA YQDYTLAQMA KSLGKTDDYN LFMKRAQNYK NVWNPDLGWM WNRTLDGKWA EPVDILRYDN GWEEGNAAQY TWFVPHDVQG LITLMGGREK FTAKLNSSFE KAQKHDYVSG KSHDNETLEE LRRVFLNYGN QPSIQTAHLF NYAGAPWLTQ YWTRQVIEKV YSGLSPDYGY SGDEDQGLMG SLSVLLKTGL FSTNGGTTPE PFYEISSPIF DRITIKLNPK YYKGKQFVID AKNNSAANLY IQSAQLNGKP LDRPWMLHET VVNGGTLTLQ MGAQPNKSWG NKPEQAPVSM SSEAAKR
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