Gene Slin_4999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4999 
Symbol 
ID8728763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6090330 
End bp6091151 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389776 
Protein GI284039846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.10099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.951437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCC CAACGCTCTA CAAACTCCTT ATTCGATCGT TTCTCCTGAC GCTGGGTATG 
CTCGTTATCT GGTGGGGACT CGATTCGTTT TTCAACGGTA CAGTCTGGGC GGGAATGGTG
GTGAGCAAAT CGGCGCTGGT GGTTGAGTAC TGCGAATTCA ATAACGTAGC GCGGTTTTTC
CACCAGCCCA TGAATACGTA TTCCAATCTG GCGTATTTCT TCTTTGGTGT CCTGATTCTG
CAAATCGGTA TCGATGATCA CAAAAACCAG GGCCTGAAAA TTCAGAACCG GCTGGAATCA
TTTCCCGCGC TCTCGGCCCT AATGGGTATC TGCTTTGTGT ATTTAAGTTT TGGCAGTGCT
TTTTTCCACG CATCGCTGAC ATGGATAGGG CAGCGCGTCG ACATGAACGG CACCTACGGG
ATTACGCTCG TTCTGGTTAG TATTGCGTTG TATCATGTGT TGTATAAAAT TAGATTGACG
CAACTCGTTA AAAACGTCTG GATCACTGCT TTAGTCATTG TAATCCTCCT GTTTTTGAAA
ATTGCTCTAT TGATTTCCAG CTCCATTCTG TTGCCTTCGT TAATTCTGGC GCTGCTGGTT
TGTATAGCGG TAAACTATTT ACAGTTCAGG AGAAAACGCT CGATTCTGTT AGGCATTGCC
AGCCTGGTGC TTATGGTGGT TGCCGTTCGT TTTCGCACGC TGGATGTGCA GAAAATTGGC
TGCGACCCGC ATTCACTAAT ACAGGGCCAT TCCATCTGGC ATTTACTGAC GGCACTGAGC
AGCGTTTGCA GTTATTCGTT TTTCCGATTT GCGAAACCCT AG
 
Protein sequence
MPSPTLYKLL IRSFLLTLGM LVIWWGLDSF FNGTVWAGMV VSKSALVVEY CEFNNVARFF 
HQPMNTYSNL AYFFFGVLIL QIGIDDHKNQ GLKIQNRLES FPALSALMGI CFVYLSFGSA
FFHASLTWIG QRVDMNGTYG ITLVLVSIAL YHVLYKIRLT QLVKNVWITA LVIVILLFLK
IALLISSSIL LPSLILALLV CIAVNYLQFR RKRSILLGIA SLVLMVVAVR FRTLDVQKIG
CDPHSLIQGH SIWHLLTALS SVCSYSFFRF AKP