Gene Slin_4989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4989 
Symbol 
ID8728753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6079782 
End bp6080231 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389766 
Protein GI284039836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0781809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0109623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTAA AACAACAAAT TGACGCCGAT ATAAAGCAGG CCATGCTGGC CAAAGATCAG 
GATAAACTGC GGGCTCTACG GGCCGTAAAA TCCATGATCC TGCTCGAAGA AACCAAAGAA
GGGCAATCCG GCGACCTGAA ACCCGAAGAC GAAACCAAAA TTCTGACCAA AGCCGTGAAG
CAGCGGAAAG ATTCGGCGGA CATCTATCGG CAGCAAAACC GCGCCGATCT ACTAGCCGTT
GAAGAAGCCG AGATTGCCGT CATCGAACAG TACCTGCCCA AGCAGCTTTC GGAAGACGAG
TTGAAAGGAA AATTACAGGC GATCATGACC CGTCTGGGCG CTTCGGTGCC CTCCGATCTG
GGTAAAGTAA TGGGCGTCGC ATCTAAAGAA CTCGCCGGGC AAGCCGATGG GAAAGCTATT
TCGGCCATGG TGAAGCAACT TTTACAATAG
 
Protein sequence
MSLKQQIDAD IKQAMLAKDQ DKLRALRAVK SMILLEETKE GQSGDLKPED ETKILTKAVK 
QRKDSADIYR QQNRADLLAV EEAEIAVIEQ YLPKQLSEDE LKGKLQAIMT RLGASVPSDL
GKVMGVASKE LAGQADGKAI SAMVKQLLQ