Gene Slin_4988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4988 
Symbol 
ID8728752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6079160 
End bp6079705 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content52% 
IMG OID 
ProductColicin V production protein 
Protein accessionYP_003389765 
Protein GI284039835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0206399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.011755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC TCGACTTACT CATGCTCATT CCCCTGGCCT GGGGGATTTT TAACGGATAC 
CGCAAAGGGC TCCTGGTGGA GATCGTTGCG ATCATCGCGT TTGTGGTGGC TATGATTGTC
GGGTTCAAGT TTCTGGCGTT CGGTATTGAC CTGCTCAGCC CGTACATCAG CCGGGAGCTG
GCCCGGAAAA TCCTGCCGTG GCTGGGTTTT TCGGTAATCT TCTTCCCGAC GGTCGTCATG
ATCAACCAGA TGGGGTTTGC CATCCGCCGT TCGTTAAAGT ACTCCATACT AGGCACATTC
GATAGTGTAG CTGGCGCAAC GGTTGGTCTT TTTACGTGGG TCTTTGGAAT TAGTGTTATC
CTTTGGTTGT TCAGTTATAT GGGCGTGAAA ATGCCCGCCC GTCAAACGGA AACTGCCTTT
TTATACCCCT ACATCCGGCC CATCGCGCCG AAAGTGATGG ATAAAGCCGC CGTTTGGGTA
CCAAAAGGCC TGGAAGAAGG GAAGAAATGG CGAAGTAGCG CCGACCGTCT CGGTCGGTTG
AATTAA
 
Protein sequence
MNTLDLLMLI PLAWGIFNGY RKGLLVEIVA IIAFVVAMIV GFKFLAFGID LLSPYISREL 
ARKILPWLGF SVIFFPTVVM INQMGFAIRR SLKYSILGTF DSVAGATVGL FTWVFGISVI
LWLFSYMGVK MPARQTETAF LYPYIRPIAP KVMDKAAVWV PKGLEEGKKW RSSADRLGRL
N