Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4988 |
Symbol | |
ID | 8728752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6079160 |
End bp | 6079705 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Colicin V production protein |
Protein accession | YP_003389765 |
Protein GI | 284039835 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0206399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.011755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAC TCGACTTACT CATGCTCATT CCCCTGGCCT GGGGGATTTT TAACGGATAC CGCAAAGGGC TCCTGGTGGA GATCGTTGCG ATCATCGCGT TTGTGGTGGC TATGATTGTC GGGTTCAAGT TTCTGGCGTT CGGTATTGAC CTGCTCAGCC CGTACATCAG CCGGGAGCTG GCCCGGAAAA TCCTGCCGTG GCTGGGTTTT TCGGTAATCT TCTTCCCGAC GGTCGTCATG ATCAACCAGA TGGGGTTTGC CATCCGCCGT TCGTTAAAGT ACTCCATACT AGGCACATTC GATAGTGTAG CTGGCGCAAC GGTTGGTCTT TTTACGTGGG TCTTTGGAAT TAGTGTTATC CTTTGGTTGT TCAGTTATAT GGGCGTGAAA ATGCCCGCCC GTCAAACGGA AACTGCCTTT TTATACCCCT ACATCCGGCC CATCGCGCCG AAAGTGATGG ATAAAGCCGC CGTTTGGGTA CCAAAAGGCC TGGAAGAAGG GAAGAAATGG CGAAGTAGCG CCGACCGTCT CGGTCGGTTG AATTAA
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Protein sequence | MNTLDLLMLI PLAWGIFNGY RKGLLVEIVA IIAFVVAMIV GFKFLAFGID LLSPYISREL ARKILPWLGF SVIFFPTVVM INQMGFAIRR SLKYSILGTF DSVAGATVGL FTWVFGISVI LWLFSYMGVK MPARQTETAF LYPYIRPIAP KVMDKAAVWV PKGLEEGKKW RSSADRLGRL N
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