| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4985 |
|---|
| Symbol | |
|---|
| ID | 8728749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6075435 |
|---|
| End bp | 6076856 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | phosphate transporter |
|---|
| Protein accession | YP_003389762 |
|---|
| Protein GI | 284039832 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00287414 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGAT TAGAAACGGA TGTTTTTATC CTCCTCTTTA TCAGCCTCTT CGCTGCCTGC
GCTTTCGAAT TTGTAAACGG ATTCCACGAT ACAGCCAATG CCGTTGCTAC GGTTATTTAT
ACCAATTCTC TGAAGCCAAC GGTTGCCGTT GTATGGTCAG GAATCTGCAA TTTTACGGGT
GTTCTGTTGG GGGGTATTGG CGTTGCCATG GGTATTGTCA ACCTGCTTCC GGTTGAGTTA
CTCGTCGACC AGAACGTGTA CCATAGTGTA GCGATGGTAC TGGCACTGCT CCTCAGTGCT
ATTATCTGGA ATCTGGGCAC CTGGTATTTT GGTCTGCCCA GTTCGAGTTC ACATACGCTT
ATTGGCTCTA TTTTGGGCGT TGGTCTGGCG TTTGCTACCA TGCCCGAAAA CAAGACAGGA
GCCGCCGTTA ACTGGGAAAA AGCCATAGAG ACGGGAGAAG CCCTTTTGCT ATCGCCGTTG
TTAGGCTTCA GTCTGGCTAT TGTACTGATG TTTATTTTAC GTCGTTCGGT ACCGGAAGAA
GCTAAGGACC AGCTATTTAA GGAGCCTAAG AAAAATACAG AGCCACCCGC CTGGGTGCGC
ACCATACTGA TTGCTACCTG TTCACTAGTT AGTTTCTTTC ACGGTAGCAA CGATGGACAG
AAAGGCGTGG GCTTAATTAT GCTTATTCTG ATCGGTATTG TTCCTTACCA TTTTGCGGTA
AAAGCAGACC TCGATCCGCG TCTGATGCAG ACCAACGTTA CGGCTATTCA GCAGACCGTA
AGTACCCTGG ATTCTACACA TTTATCCTCG GCAAACCGCG TCCGGCTGGT GCAAACGAAT
GCCGAGCTGG CAGAGTTGAG TGCGCTGGTA AACGGTCCAC TGGTTGAGGG TAAGATTCCG
AACGAGAAAC GGTTGGACGT ACGCCGGGAT TTGCTCCTCA TCAACAGCAA CATTAAAAAA
ATTACGGCTG ATGAAGGATC AAACCTTAGC ACAGCTCAGG TAGCCCAACT GAACAAAAAC
TTGGGTGAAG AGAGCGGTTT GCGCCGGTTT ACGGATTACG CACCGCTTTG GGTTATACTG
ATGATCGCCT TGTCGCTGGG GCTTGGTACC ATGATTGGCT GGCGCCGGAT TGTGGTAACG
GTAGGCGAAA AGATTGGTAA GCAACACCTG ACGTATGCAC AGGGCGCATC GGCCGAGCTG
GTAGCAGCTA TGATGATCGG TATGGCATCC TGGCTGAAAT TGCCCGTTAG TACAACGCAT
GTACTTTCGT CGGGTATTGC CGGGAGCATG GTGGCTAACA AAGGCGTTAA AAACTTACAG
GCCGGAACGG TCAAGAATAT TGCGCTGGCA TGGATACTGA CGCTACCCGT TTCGGTGTTG
CTATCGTTTA CGCTTTATAT CTTCTTCCGC TGGATATTGT AG
|
|---|
| Protein sequence | MFGLETDVFI LLFISLFAAC AFEFVNGFHD TANAVATVIY TNSLKPTVAV VWSGICNFTG
VLLGGIGVAM GIVNLLPVEL LVDQNVYHSV AMVLALLLSA IIWNLGTWYF GLPSSSSHTL
IGSILGVGLA FATMPENKTG AAVNWEKAIE TGEALLLSPL LGFSLAIVLM FILRRSVPEE
AKDQLFKEPK KNTEPPAWVR TILIATCSLV SFFHGSNDGQ KGVGLIMLIL IGIVPYHFAV
KADLDPRLMQ TNVTAIQQTV STLDSTHLSS ANRVRLVQTN AELAELSALV NGPLVEGKIP
NEKRLDVRRD LLLINSNIKK ITADEGSNLS TAQVAQLNKN LGEESGLRRF TDYAPLWVIL
MIALSLGLGT MIGWRRIVVT VGEKIGKQHL TYAQGASAEL VAAMMIGMAS WLKLPVSTTH
VLSSGIAGSM VANKGVKNLQ AGTVKNIALA WILTLPVSVL LSFTLYIFFR WIL
|
|---|
| |