Gene Slin_4974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4974 
Symbol 
ID8728738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6060996 
End bp6061313 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content42% 
IMG OID 
ProductProtein-tyrosine phosphatase, low molecular weight 
Protein accessionYP_003389751 
Protein GI284039821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000359638 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGTAC TTTTTGTTTG CAGCAGAAAT CAATGGCGAA GCCCAACTGC CGAAACAATT 
TATAAACGCC ATCCCATCCA CAACGTAAAG TCAGCCGGGA CAGAGCCATC TGCCCGAATC
AAAATAACAG CCAAGCTTAT TGACTGGGCA GATATAATCT TTGTGATGGA GAAACGTCAT
AAAGAACGTA TCACTGGCCG ATTCACAGAT GTAGTCAATA GTAAGCAGAT TATAGTTCTT
GACATTGCTG ACGACTATGA ATACATGGAT GAGGAGTTGA TCGACTCCAT AAAAGCTTCA
GTTTCACCTT ACCTTTAG
 
Protein sequence
MNVLFVCSRN QWRSPTAETI YKRHPIHNVK SAGTEPSARI KITAKLIDWA DIIFVMEKRH 
KERITGRFTD VVNSKQIIVL DIADDYEYMD EELIDSIKAS VSPYL