| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4869 |
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| Symbol | |
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| ID | 8728633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5930876 |
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| End bp | 5931808 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003389646 |
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| Protein GI | 284039716 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATCC CCTCTTCAGA CCGACGAACT TTTCTCAGGA CCGCTGCGGC TAGCCTGCCT
TTTGTTGCCT CAACGGGAAC GGTCTCTGCC CTACGTGGAA GCAGCGGGGT AGCAACTAAG
GTGAACCCCA TCCGGCTAAG CTGTAACCTG TATTCGTTCA ACGAGCCGCT GATGAGTGGG
CAGATGACGC TCGAACAGGT GCTGATGTTC TGCGCCGATC TGGGTTTCGA CGCCGTCGAC
CCAACGGGGT ACTATTTCCC AACGTATCCG GCCTTACCAG ACGATAGCTA CGTATATCAG
ATCAAGCGAA AAGCCTTTCG GCTGGGCCTC GACATCAGCG GAACGGGTGT ACGCAATGAC
TTTACACTGC CCGATGCCAC CCGCCGGAAT GCAGAAATCG ACCTGGTAAA GAAATGGACA
GGGGTAGCCG CCCGGCTAGG CGCACCGGTG ATCCGTATAT TTTCAGGTAC CGGTAAAGAA
CTGCCAATGA ACTATAATCG GGAGGAAGTC ACGACCCGGG TTGTCGATGC CATTCGGGAA
TGTACGGATT ATGCGGCCCG GCAGGGCGTC ATGCTTGTTT TACAAAATCA CGCCGATTTT
ATTCAAACGG CCGATCATGT TCTGAACATT GTGCGCCAGG TCAACTCCGA GTGGCTGGCC
GTCAACCTCG ACATTGGCAG CTTCAAAATT GGCGATCCCT ATGAGCAGAT CGCCCGTGTA
GCGCCCTATG CCGCCACCTG GCAGCTTAAG GAAAACCTGT TTGTCGACGG CAAAGAAGAG
GTAACCGACC TCCGTAAAAT CATGCGTATC GTACACGATT CCGGCTATCG GGGGTACCTC
CCCATCGAAA CGCTCGGCAA AGGAGATCCG CGCGTGAAAG TGCCGGTGTT CTACGAAAAA
GTAAAAAAAG CGCTGACCGC AATAACAGGC TAG
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| Protein sequence | MPIPSSDRRT FLRTAAASLP FVASTGTVSA LRGSSGVATK VNPIRLSCNL YSFNEPLMSG
QMTLEQVLMF CADLGFDAVD PTGYYFPTYP ALPDDSYVYQ IKRKAFRLGL DISGTGVRND
FTLPDATRRN AEIDLVKKWT GVAARLGAPV IRIFSGTGKE LPMNYNREEV TTRVVDAIRE
CTDYAARQGV MLVLQNHADF IQTADHVLNI VRQVNSEWLA VNLDIGSFKI GDPYEQIARV
APYAATWQLK ENLFVDGKEE VTDLRKIMRI VHDSGYRGYL PIETLGKGDP RVKVPVFYEK
VKKALTAITG
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