Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4809 |
Symbol | |
ID | 8728573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5864106 |
End bp | 5864927 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003389586 |
Protein GI | 284039656 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00887466 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.569054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGCTA TATCAAACAA CCGGATTGCC ACGCAGCCAA CACAATTATT GACAGCCGAT GAACGGGCCT TTTTTGAAAA AAATGGATTT CTACATATCA AAAACTTCGT AAGCCGCGAC ACTGTGCAGC TTTTTCTGCG CGAATTACAA CAGGTGGAAG CGGATTGGAT TGCCGAAAAA GTTGACAAGA TCAACGGTAT CCCCATAAAA TTTGGCCGGG ATGAAAACGG CAAGCCTATT GTTCAGCGGT TTGCGTTTAC CTCGCTGTTT AGCCCGGTCC TGCATGAGTT TTTACAGGAT GAGCGCCTAA AGGAACTGAC TCAGTTATTA AAGCCATACG ATGGCCGTAT TGGCGAAGAA GAGAAGGACG GATTGGTTGT GAATCACTAC GTTCGTACGC CGGAGAGCAA CTTCTCTAAG ATGGGCTGGC ATACCGATAG CCCACGCGAT TTGTTCTTGG GGCAGCGGAT TCGGCCGATG CTGAACGTGG GGCTACACCT CGACGACTGC CCCATGAGCA ACGGCGGGCT ACGCGTGCTG CCGGGTACGC ACAAGCAAAA TACCCTGCTG ACGCTCTTCC GTAAACGTCA GTTCATCGAC CACCGCCCCG ACCCGCGCGA AGTTGGGTTC GACATTGAAG CGGGCGATCT GACCATCCAC AATGGTAGTC TGTGGCACCG CGTCGAGCAG TCGCCAAACG TGGGGGCCTC CAGCCGTCGC CGGGTCATGT ATATTCCGCT GGTGACGGGC GAGTACCAGC CCAAAAATGC CGCCAGCAAG ACGCCCTTCT ATCACCGGTT AGGCGCTAAA ATCTTTCGGT AA
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Protein sequence | MVAISNNRIA TQPTQLLTAD ERAFFEKNGF LHIKNFVSRD TVQLFLRELQ QVEADWIAEK VDKINGIPIK FGRDENGKPI VQRFAFTSLF SPVLHEFLQD ERLKELTQLL KPYDGRIGEE EKDGLVVNHY VRTPESNFSK MGWHTDSPRD LFLGQRIRPM LNVGLHLDDC PMSNGGLRVL PGTHKQNTLL TLFRKRQFID HRPDPREVGF DIEAGDLTIH NGSLWHRVEQ SPNVGASSRR RVMYIPLVTG EYQPKNAASK TPFYHRLGAK IFR
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