| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4806 |
|---|
| Symbol | |
|---|
| ID | 8728570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5861243 |
|---|
| End bp | 5862184 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1684 |
|---|
| Protein accession | YP_003389583 |
|---|
| Protein GI | 284039653 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.997979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.94206 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTA TTAATCAGCC TATCGGCCCT TTAAATAACT ACTCGCGGTG TTTTTTCGGG
ATATGGTTTC TGGCGATGGC GGCCTCCGTT GGCTGGCGTA ATGCCGACGG GCCGTCTTAC
AAAGAACAGA TTGATGCCTG GCATCAGACG CGCATCAACT CCCTCAAAAG CGAAACCGGC
TGGCTAAATC TGGCCGGACT ATTCTGGCTC AGCAACGGCA AGAACTCGCT CGGACGCGGC
ACCGACTTCG ATCTGGCTTT TCCAGTTGCC GATGCGCCCG CCGATTTGGG TGCGCTTTAC
CTGGAAAATG GGCATGTGCG CTTTGTGCCC AAAGTGGGTG CAGCCGTTCT GGCTGATGGC
AAACCTGTTA CCGGGCCGCT GGTTATTTTT GCTCCCGATC AGAAACCGCT TGTGCTGGCA
CATGGCTCTC TGCGCTGGTT TATCATCAAG CGTGGACCTA AATATGGCGT TCGGCTCCGC
GATCTGGACA GCCCGCAACT GAAAGAGTTT CAGACCATCG ACCGCTACCC CATCGATGAA
AGCTGGCGAA TAAAGGCCCG GCTCGAAACC CCATCGACAC CCACGACCAT CCCGATCATT
GATGTGCTGG GCCTGACGTC GCAGCAGCCG CTGGCGGGTA CGCTGGTCTT TGAGCGGGCC
GGAAAAACGT ATCGGCTGGA TGCCGTTGAA GAGGGAGACA AGCTTTTTAT CCTGTTCGGC
GATCCAACTA ATGCCCATGA AACCTACGGG GCCGGCCGGT TCCTGTATGC CGACAGGCCT
GTTTCGGGCG TTGGTGAGAA AGGATTGGTT GTTCTGGATT TTAATCAGTC TATTAATCCG
CCCTGCGCGT TTACTCCGTT TGCCACCTGT CCGATTCCGC CGAAGCAGAA CAAGCTGGCA
GTGGCCGTGA CGGCGGGCGA AAAACGATAC GGTGAGCATT GA
|
|---|
| Protein sequence | MKFINQPIGP LNNYSRCFFG IWFLAMAASV GWRNADGPSY KEQIDAWHQT RINSLKSETG
WLNLAGLFWL SNGKNSLGRG TDFDLAFPVA DAPADLGALY LENGHVRFVP KVGAAVLADG
KPVTGPLVIF APDQKPLVLA HGSLRWFIIK RGPKYGVRLR DLDSPQLKEF QTIDRYPIDE
SWRIKARLET PSTPTTIPII DVLGLTSQQP LAGTLVFERA GKTYRLDAVE EGDKLFILFG
DPTNAHETYG AGRFLYADRP VSGVGEKGLV VLDFNQSINP PCAFTPFATC PIPPKQNKLA
VAVTAGEKRY GEH
|
|---|
| |