Gene Slin_4754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4754 
Symbol 
ID8728518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5788381 
End bp5789154 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389531 
Protein GI284039601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTA CCTTTAAATC ATCCAAAAAG TGGTTACTCT CGGCAGGAGG TATTTTTACC 
CTGTTCGGAC TTATTGCTTT TACGGAAGTT CGACATGGGC AAAAACGCGT TAAATCGGTT
GTTGTCAGGT TGGATGAGGT TGACGGTCAT CGTTTTTTGA CACGTCGGGA TGTAATTGGG
TATCTTACCA ACGAGGGGGC CGACCCGGTA GTTGGGGAAA CCTACGACAA TGTCAACCTC
CGACGGCTGG AGGAAAGGCT GCGGCAGCAT GGTTTAGTAA AAAGTTGTCA GGTCTCCCGT
GACTTAAATG GTGACTTGCT CGTCAGTATA GAGCAGCCTC ACCCGTTGGC GCGGCTAATG
CCGTCGGGTG ATGGAGTTAG AAGTGTATCG GGGCAGTATG TAAGCGAAGA AGGCCGTTTT
TTCCCGATTT CGATGAATTA CTCAGCGCGG GTACCGGTTT TAACGGGGAG TTTTTTTGCT
CAGAACCGTT CGTTGGCGAA CAAACGAAAC CAACCGCTGT TGGAATTGTT AAAGCGCATA
CATGACGACG CATTCTGGCG GGCGCAAATT ACCGAATTAT CGGTAGATGA GCAGGGGGAT
GTAACTATGT GGCCGCAGAT AGGTAACCAC CGGATTGAGT TTGGTCCGCC TACTGAGCTG
GATGCGAAGT TTAAGAAGTT AAAATTAGTG TATACGGACG TTTTGCCGGC TAAAGGCTGG
AATCGCTATA GCCGGGTGAG CGTTCAGTAC CGAAATCAAA TAGTTTGCGA ATGA
 
Protein sequence
MFSTFKSSKK WLLSAGGIFT LFGLIAFTEV RHGQKRVKSV VVRLDEVDGH RFLTRRDVIG 
YLTNEGADPV VGETYDNVNL RRLEERLRQH GLVKSCQVSR DLNGDLLVSI EQPHPLARLM
PSGDGVRSVS GQYVSEEGRF FPISMNYSAR VPVLTGSFFA QNRSLANKRN QPLLELLKRI
HDDAFWRAQI TELSVDEQGD VTMWPQIGNH RIEFGPPTEL DAKFKKLKLV YTDVLPAKGW
NRYSRVSVQY RNQIVCE