Gene Slin_4596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4596 
Symbol 
ID8728360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5574636 
End bp5575190 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content45% 
IMG OID 
Producttransposase IS4 family protein 
Protein accessionYP_003389374 
Protein GI284039444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA GTTACCAAGC CCTGACAGAT GCTCAGTGGC AAGTTATGAT GCCTTTTTTT 
GACTTACAAC GAAAACGAAC AGTTGCCTTG CGCCAAGTCG TTGATGCTTT GTTTTATATA
CTGCGAACGG GCTGTCAATG GCGTAACTTA CCCGCTAATT ATCCTCATTG GCAAGCTGTA
TACTATTACT TTGACAGATG GAAAACGAAT GGTTTGTTCG AGCAGATTAA TCGAGCCTTG
AATCAAATAG ACCGTGGACA AGAAGGCCGA GCCCCTTATC CATCTATCCT TAACACTGAT
AGTCAAAGCG TTAAGTTGAC GCCTATGATT TATGAACATC GGGGTTGGGA TGGACACAAG
AATGTCAACG GGCGTAAGCG TCAGTTGGTA GTTGACAGTG GTGGGCGACT TTGGGTGGCT
AAAGTGCATG CGGCTAACCA GGCGGATGGC GTCTCTTCTA TAAGTTTGGT GGCTGATATT
GCTTACTTAA ATGATCGCCT GACAAAAATC TTTGGTGATC AAGCCGCTGG TACTGTCGTG
AAAAACAAAT TTTGA
 
Protein sequence
MQTSYQALTD AQWQVMMPFF DLQRKRTVAL RQVVDALFYI LRTGCQWRNL PANYPHWQAV 
YYYFDRWKTN GLFEQINRAL NQIDRGQEGR APYPSILNTD SQSVKLTPMI YEHRGWDGHK
NVNGRKRQLV VDSGGRLWVA KVHAANQADG VSSISLVADI AYLNDRLTKI FGDQAAGTVV
KNKF