Gene Slin_4583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4583 
Symbol 
ID8728347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5555063 
End bp5556040 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content52% 
IMG OID 
ProductAcyl-(acyl-carrier-protein) desaturase 
Protein accessionYP_003389361 
Protein GI284039431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.489587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATAT CTGGCACACG TTTGGACGTA ATGCGATTCG TCGGTGAGAA AATCGATGCA 
TCGGTGGATG AATTCCTTAA GCCTATCGAG ACTAATTGGC AACCTGCTGA TTTGTTGCCC
GATTCCACAC GAGAATCATT TTTGGATGAA GTTAAGTTAC TCCGCGAAAG CACCCGCGAG
TTATCTTACG ATTACGTAGC CGTGCTGGTT GGCGATACAA TTACGGAAGA AGCTTTGCCA
ACGTATGAAT CGTGGCTGAT GGATATGGAA GGCATTGAGC AGGGCAGCAC AGCAGGCTGG
ACGCGCTGGA TTCGTAGCTG GACGGCAGAG GAAAACCGCC ACGGCGACCT GCTGAACAAG
TTTCTGTACC TGTCGGGTCG GGTAAATATG CGGGCTATGG AAGTATCGAC GCAGTACCTG
ATTGCTGATG GTTTCGACAT TGGTACCGGC AAAGACCCCT ACCGGAACTT CGTTTACACG
TCTTTTCAGG AGTTAGCCAC CAACGTGTCG CACCGCCGAA CGGCCACGCT GGCCAAACAG
GCGGGCTGCA ACCAACTGTC GAAAATTTGC GGAGTCATCG CGTCCGACGA GATGCGCCAT
GCCAAAGCGT ACAAAGATTT TGTCCGTCAG ATATTTGAAG TCGATCCGTC TGAAATGATG
CTGGCCTTTG AAGACATGAT GCGTAAGAAA ATCGTGATGC CAGCGCACTT CCTCCGCGAA
AGTGGGGTGA AGATCGGGCA GACATTCAGC CATTTTTCGG ATGCGGCCCA GCGGTTGGGC
GTGTATACGA CCTACGATTA CATCGAAATT GCTGAATCGC TGCTGGTCGA CTGGAAGATT
GACACCATCA CCGATCTCAA CGATGCCGGT CAGCGTGCCC GCGATTATGT GATGGCCTTA
CCGGGCCGCC TACGCCGGAT TGCCGAGCGC ACCAAAGTTC CTACGCTTGA GTATCCATTT
AGCTGGATAG CCGGGTAA
 
Protein sequence
MIISGTRLDV MRFVGEKIDA SVDEFLKPIE TNWQPADLLP DSTRESFLDE VKLLRESTRE 
LSYDYVAVLV GDTITEEALP TYESWLMDME GIEQGSTAGW TRWIRSWTAE ENRHGDLLNK
FLYLSGRVNM RAMEVSTQYL IADGFDIGTG KDPYRNFVYT SFQELATNVS HRRTATLAKQ
AGCNQLSKIC GVIASDEMRH AKAYKDFVRQ IFEVDPSEMM LAFEDMMRKK IVMPAHFLRE
SGVKIGQTFS HFSDAAQRLG VYTTYDYIEI AESLLVDWKI DTITDLNDAG QRARDYVMAL
PGRLRRIAER TKVPTLEYPF SWIAG