| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4568 |
|---|
| Symbol | |
|---|
| ID | 8728332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5540057 |
|---|
| End bp | 5541397 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | PARP catalytic domain protein |
|---|
| Protein accession | YP_003389346 |
|---|
| Protein GI | 284039416 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0566716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC TAAATCAGTT GTTACAACGG GTGTGGGGGC AGTCTGCACC AGCCACCCTC
CTTCAAACCT CCCGCCCTGT ATCGTCTACA GCCGAACCCG TTTTGGCTTC GCAGCCAATC
CGGCACCTGC GTACCATGAA GCTCATGATG GTAACGGCCG AGAACAACAA CAAATACTAT
GAAATGCGGG AGAAGGAAAA TGGCACCTTC GAAGCACACT ATGGCCGCGT AGGTGGTTTC
CGAAGCAAAT CGGTTCACCC AATGGCGCAG TGGGAACGGA AAGTCCGCGA GAAAAAATCG
AAGGGCTACA CCGATCAGAC CCACCTCTTT GCCGAAAGCC GACCTGAAAC AGATGCCAGT
ACCATTGCCA ATCCAGAGGT TCGAAACCTG ATGGCACGAC TGCTGGAATT AGCCAGACAG
TCCATCTTTC AGAACTATGT CGTTACGGCT CAGGAGGTAA CGCGTAAACA GGTCGAACAC
GCTCAGCAAC TGCTCGACGA GCTGGCCAAC CTTCTGGCGG TCAACATGGA TACAGCGGCC
TACAATGCCA AATTGCTGGA GCTGTTCAAG GTGATACCCC GCCGAATGAG CAAGGTAGGG
GAGCACTTGG CAGGCGCATC GCCCCAGTCG GCCGAGGAAC TACAACCCCT TCGCGACCAC
CTCGCCGAAG AGCAGTCTAC CCTCGATGTG ATGCGCGGTC AGGTTGAACT GGCCCCCGAA
TCAACCCCCG ATGACCAGCC CCAGCCAACG CTGCTGGACA GCCTGAACCT GGCTATCGAG
CCGGTGACCG ATGCGCATAT CATTACCCTG ATCAAGCGCA TGATGGGTAC CGATGCCGTC
AAATTCGACG CAGCGTTCAG TGTCCGCCAT ACGGCTACCG ATGCCGCTTT CGATGCCTAT
GTGCGTCAAC AGAAGAATCG AAAAACCATG GCGCTCTGGC ACGGAAGCCG CAGCGAGAAC
TGGCTGTCTA TTTTGAAAAC GGGGCTGTTG CTGCGTCCGG CCAATGCCGT TATTACGGGC
AAGATGTTTG GCTACGGCAT CTACTTCGCC GACCAGTTCA GCAAATCGCT CAACTACACC
TCACTGAACG GCTCGGTATG GGCCAACGGT CGGCAGTCGG AAGGGTATCT GGCTATTTAT
GAAGTACATG TCGGCGAACA ACTGGAGCTG ACAAAACACG AACCCAGCCA CATGCAACTG
GACATTAACG CCCTGAAGCA ACTTGACCCA CAGTATGATT CCGTATTTGC CCGGCAGGGG
GTCAGCCTGC AGAAGAACGA ATTCATTGTA TACAACCCGG CGCAGTGTAC GGTTCGGTAC
ATTGTCAAAA TCAAGGCTTA A
|
|---|
| Protein sequence | MTMLNQLLQR VWGQSAPATL LQTSRPVSST AEPVLASQPI RHLRTMKLMM VTAENNNKYY
EMREKENGTF EAHYGRVGGF RSKSVHPMAQ WERKVREKKS KGYTDQTHLF AESRPETDAS
TIANPEVRNL MARLLELARQ SIFQNYVVTA QEVTRKQVEH AQQLLDELAN LLAVNMDTAA
YNAKLLELFK VIPRRMSKVG EHLAGASPQS AEELQPLRDH LAEEQSTLDV MRGQVELAPE
STPDDQPQPT LLDSLNLAIE PVTDAHIITL IKRMMGTDAV KFDAAFSVRH TATDAAFDAY
VRQQKNRKTM ALWHGSRSEN WLSILKTGLL LRPANAVITG KMFGYGIYFA DQFSKSLNYT
SLNGSVWANG RQSEGYLAIY EVHVGEQLEL TKHEPSHMQL DINALKQLDP QYDSVFARQG
VSLQKNEFIV YNPAQCTVRY IVKIKA
|
|---|
| |