Gene Slin_4536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4536 
Symbol 
ID8728300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5501173 
End bp5501757 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content49% 
IMG OID 
Productputative PAS/PAC sensor protein 
Protein accessionYP_003389315 
Protein GI284039385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCA ATTGTCCTCT GTCAAGTAGA TGCGGAGAGA TTATTTTACC TACCATTATG 
GACTTTTGCG GACCTTACGA CGAACAACTC GCTGCACATT ATCGGCAGTC TTTACTAACG
CCTTTGTTAG CAGGCTGGGA GTTCAGAGAG CGACCTGCGC TCGAAACGGG CCATATCGGG
TGGCAACTGT TGGCAAAAAA GCAGGACTGG CTATTGACAG CCCCCATTCG ACATGATCTG
CTAAGCGACG AATGGGCAAT TGTCGTTACA GATGCCGAAC AGATTATACA ATATGTGAAC
CCGCTGTTCG AGAAGATGAC CGGGTATACC AACACGGAAG CGCTGGGGCG TCGTCCTAAC
TTTTTACAGG GTGAAGGAAC GTCGCTGCTG GCCCGGCAAC GTATGCGGAA GGCCATTGAG
AAAAAACGGA CGGTGAGCGA GTTGCTGCTG AATTATAGGA AAGATCGAAC GGCCTACTGG
TGCAACGTTG TGATTCGCCC GATTACAAAT CATCAAAAAG AAATCGTCAA TTTCATCGCC
TTCGAGAAAG AAGTGCAACT GGAGGAGTTG CCCGCCGACC GTTAA
 
Protein sequence
MITNCPLSSR CGEIILPTIM DFCGPYDEQL AAHYRQSLLT PLLAGWEFRE RPALETGHIG 
WQLLAKKQDW LLTAPIRHDL LSDEWAIVVT DAEQIIQYVN PLFEKMTGYT NTEALGRRPN
FLQGEGTSLL ARQRMRKAIE KKRTVSELLL NYRKDRTAYW CNVVIRPITN HQKEIVNFIA
FEKEVQLEEL PADR