| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4508 |
|---|
| Symbol | |
|---|
| ID | 8728272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5466218 |
|---|
| End bp | 5467630 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003389287 |
|---|
| Protein GI | 284039357 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCAC AACTCAGCAC GTTTGATAAC ATGAAAAGAT TAGCTGCTTT TCTACTATTT
ATCTCGATTA TACCTACCTC ATCAGCGCAA ACAGCCACCC TGCCTACCCT TCGGACGAAG
CAGAATAAAA TGGTCATGTA TATGGAAGGT GAACGCGGCA ACTTCAATGG GATTAACGAA
TTACCCGCAG ACTTCCCGTA CGATTTTGGC ACTAAGGCAG AGCATACCCC CCTAACCCTC
GTTTCGGAGC AGGATTCTAT TGTGTTGTTG CTCAGGCATG GTGGCCAAAC TAATTTTGAT
ATTATCCGGC AGGCAAAAGG CGATACCGTT CACTGCCATT TCTCCAGCCA TCCGTTTGTC
AAAATGGCTG TTTTTACGGA TGCCTATAAA AAGGCCAATC AGGGCAAAAC GATTATCGAC
GTTCCCGAAG TTTATGAGTT GATCAATGTC ATTTTTGCCC TCACCGACTA CGGCAAGACC
GATGCCATCG AAAAAGACAC GGAGTATTAT ACGCAGGTTA TGAGCCATTT TTCGCCGTAC
AAAAATCACC CGGCGGTTCA TACAATGGAC TCTTTGCTGC GAAAATCAGT GGATAATTAC
CACAACATCA AAATGGATAG TTATGCCTAC TTATTTGACG GGAGCAAGCT GGCAAAAAGC
CCCGTTTATG ACCGGATTAG CTGGGGCGAA GTGAATGAGC TCACGCCTTA CATTCCGCTT
GTGGAGCAGT TTGCCAATCA ATCCAACTTT CGCTCGTTCT TTCAGAAGCA CCAGCCCTAC
TACACCGGCC TGATCAGTGA TTTCAGGAAG AATGTGGACG TCGCCACAAT GAAATCCTGG
CTGGACAAAC AGTTTCCGAC AACACGCTAC TCCGCCATAA AGATGATTTT CTCACCCCTG
GTGGGCAACA ACCAATCGGC AAATCGGTTT GATGATAATG GTTTCACGGA AGCGCAGTGT
CACATAAATT ATCCATTTTT CAGTAAAGCA ACAGCAAGTC AATCTAAAGA CCTTATCCGG
GGTAGACGGA TGATTATTTC CTTCACGGAA CTGAACCATA ACTACCTGAA TCCCGAAGCG
GAGAAGTACG ATAATAACGT GGCAAAGGCC TACAAAAATA TGGCCGACTG GATAACCGAG
GGCAGCCCGT CCATGAACTA TAACAACCCG CTTTTGTGCT TTGAAGAGTA CATGAATTAC
GCGCTCGTTA CGCTACTGTT CAATGACCTC TTCGACGCCA AAACGTTCGC GATCCTTCAC
GAAGAGAACA ATAAACGGAT GGTAACAAAC CGGGGATTCA AGCGATTCAA GGATTTTAAT
CAGGAGCTAC TTCAGCTGTA TAGAAACAGA AAACCGGGCC AGACCGTTGC CGATCTGTAC
CCGGTTATTA TCGCGTGGGC CGCTAAACAA TAA
|
|---|
| Protein sequence | MQPQLSTFDN MKRLAAFLLF ISIIPTSSAQ TATLPTLRTK QNKMVMYMEG ERGNFNGINE
LPADFPYDFG TKAEHTPLTL VSEQDSIVLL LRHGGQTNFD IIRQAKGDTV HCHFSSHPFV
KMAVFTDAYK KANQGKTIID VPEVYELINV IFALTDYGKT DAIEKDTEYY TQVMSHFSPY
KNHPAVHTMD SLLRKSVDNY HNIKMDSYAY LFDGSKLAKS PVYDRISWGE VNELTPYIPL
VEQFANQSNF RSFFQKHQPY YTGLISDFRK NVDVATMKSW LDKQFPTTRY SAIKMIFSPL
VGNNQSANRF DDNGFTEAQC HINYPFFSKA TASQSKDLIR GRRMIISFTE LNHNYLNPEA
EKYDNNVAKA YKNMADWITE GSPSMNYNNP LLCFEEYMNY ALVTLLFNDL FDAKTFAILH
EENNKRMVTN RGFKRFKDFN QELLQLYRNR KPGQTVADLY PVIIAWAAKQ
|
|---|
| |