| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4506 |
|---|
| Symbol | |
|---|
| ID | 8728270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5463629 |
|---|
| End bp | 5464939 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003389285 |
|---|
| Protein GI | 284039355 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCATAATTCC CATACTTCTC ACGGGCCTCA TGTTGACGCA GGTTGCCTGT
AATAAAGAAT ACCTGAACCC GAGTACCATC AGCCAGCCGC AGGCGGTCAG TTCGCCCGAT
GGGTTGATGA CGCTCGCCAA TGGACTGCAG TACCGGTATA CCACCGGGGG GGCGTTGAGC
GTACTGTATG CCAGCACCGC CGGAGCGGGC CTGACCACCC GCGAGCAGGC CGTTCTGAAC
GTGGGGAACC TCGACGAGGC TAACCTCGCC GTTGGTGCCA GTACGGTAAG CAACATCAAC
AGTGTGGTAC GTAATCTGTG GACACAAAGC CACCTGGTAC GTTCCAACGC CGAACTGATT
CTGGCTAATA CGGGTGTTGT TTCGGATGCC GGTACGAAAA GCGGAATAGT TGGCTATGCG
TCCATTTTCC GGGCCCTTTC GCTGGGTACA CTCGGCATGT TTTTTGAGCA GTCGCCGGTA
ACGACGGGAA CGAACGTCGC GTTTGTTCCT CGGGTGCAAG TGTTCAAAGA AGCGGTTTCA
ACGCTCGAAA CAGCGGCCAC CCAACTAGCC AGTGCACCGG TATCGGCTGA CTTCACGGGC
AAAGTTGTTC CGGGGATCGA TATCGCAAAC ACGATTCAGG CCCTGATTGC CCGGTATTCT
CTGCTTTCGG GAGATTACGA CAAGGCGCTG GCTGCTGCGG CCAAAGTTGA CCTGACCAAA
CGATCTGTCT ACAACTTCGA CGATAACACC CGGAATCCGC TGTTTGAGTA CACGTTTGGC
AACCTGAACG TGTTTCAGCC CACTAACGCC AATCTGGGTC TTCCAGCCGC GCTGGCTCCG
GATGCTGCCG ATAAGCGAAT TGCGTTCCTG ACAAAGCCCA GCACCAACAC GGCCGTTGCG
CCGGTTATTG CCACCGCTTT CTATACGGCC AATAATGCTG CGGTTCCTGT TTATGTACCG
GGTGAAATTC TGTTGATTCA GGCCGAAGCG TATGCCCGGA AAGGCGATCT GACCAACGCC
GTTGCGGCAC TCAACAAGGT GCTGACGAAA ACAGCCGCTC AGGATGCGTT TGGTTTAGGG
GCAGCTTTAC CAGCCTATTC AGGAGCGCAG ACGGCCGATG CCATTCTGAC GGAGATTTAC
CGAAATCGCC AAATTGAACT GGCCTATCAG GGTTTCCGTC TGGAAGACAG CCGCCGATTC
AATCGGCCGG GGCCGGGTAC TACGGGTGCC GAGCGCAACC GCAATTTCTT CCCCTATCCG
CTGAATGAGC GTAACAACAA CACCAATACG CCACTCGACC CGGGGATTTA G
|
|---|
| Protein sequence | MKKIIIPILL TGLMLTQVAC NKEYLNPSTI SQPQAVSSPD GLMTLANGLQ YRYTTGGALS
VLYASTAGAG LTTREQAVLN VGNLDEANLA VGASTVSNIN SVVRNLWTQS HLVRSNAELI
LANTGVVSDA GTKSGIVGYA SIFRALSLGT LGMFFEQSPV TTGTNVAFVP RVQVFKEAVS
TLETAATQLA SAPVSADFTG KVVPGIDIAN TIQALIARYS LLSGDYDKAL AAAAKVDLTK
RSVYNFDDNT RNPLFEYTFG NLNVFQPTNA NLGLPAALAP DAADKRIAFL TKPSTNTAVA
PVIATAFYTA NNAAVPVYVP GEILLIQAEA YARKGDLTNA VAALNKVLTK TAAQDAFGLG
AALPAYSGAQ TADAILTEIY RNRQIELAYQ GFRLEDSRRF NRPGPGTTGA ERNRNFFPYP
LNERNNNTNT PLDPGI
|
|---|
| |