Gene Slin_4430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4430 
Symbol 
ID8728190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5368549 
End bp5369436 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content52% 
IMG OID 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_003389210 
Protein GI284039280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.266728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAACT CTCTTCAATT GATTCTTGGT TTATTGCTGG TTGGCGGCTT CACTTCCTGT 
CAAAAAGAAA ACGTCGATAC CAGCGGAGCC GATGTGTTTG AAGCCGACAA GGCAATTATT
CAAGATTATG CAGCCAGTAA AGGGCTTAAC GGGTCAATGA CCGCCAATGG CATATATTAC
GCGCTCACCA AAGCCGGAGG TTCTACCGTA AGCCCGGCCA ACGGGCAGGA AGCAGAGTTC
AGTTACACAC TATACACACT GGTTCGGGGT AGCGGTACTG CCGTAACCGA CAAGTTTGTT
GATTCGACCT ATGCCACCAA GTCTAGCTAT ACCTATCTGG TGGCTACGAA TCCGGGCTTA
ACGGAAGGGC TGTTCCGCAT GCGGGAGGGC GATCAGGGCG TTATCCTGTT GCCGTCTGAT
TACGCCTTTG GCTCATCGGG GAGTTTGGAT GGCGCTATCC CGCCCAACAC GCCGGTTCGG
CTCAACGTAA CCCTGAAACG GATACGCACT GAAGATCAGC AGATAAACGA ATACATGACG
GCTAATAAAC TGACACCTAC CGAGGTCACG GTAAGCGGGC TGCGGTTTAT TAAAACAGTA
ACAAACAGCA ATGGTGCGAC CCCGCTGGGC AATCAAACCC TTAATGTGCG CTACCGAGGC
ACTTTGCTGA GGTCGTCGTC GGCTTTTGAC AGCACAGGCA CTGGTACCGT TGGGTTTACA
CTGGGCCAGT CTGTTGCTGG TTTCGATGAA GGACTGTCCA AACTTAAAGT TGGTGAGAAA
GCAACGATTA TCATGCCATC CAAAATCGGC TACGGAGCCA CGGGCCGGTC GGTTATTCCG
CCCTACGCAC CCATGCGCTT CGATATTGAA CTGGTATCAG CCCAGTAA
 
Protein sequence
MRNSLQLILG LLLVGGFTSC QKENVDTSGA DVFEADKAII QDYAASKGLN GSMTANGIYY 
ALTKAGGSTV SPANGQEAEF SYTLYTLVRG SGTAVTDKFV DSTYATKSSY TYLVATNPGL
TEGLFRMREG DQGVILLPSD YAFGSSGSLD GAIPPNTPVR LNVTLKRIRT EDQQINEYMT
ANKLTPTEVT VSGLRFIKTV TNSNGATPLG NQTLNVRYRG TLLRSSSAFD STGTGTVGFT
LGQSVAGFDE GLSKLKVGEK ATIIMPSKIG YGATGRSVIP PYAPMRFDIE LVSAQ