Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4430 |
Symbol | |
ID | 8728190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5368549 |
End bp | 5369436 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | peptidylprolyl isomerase FKBP-type |
Protein accession | YP_003389210 |
Protein GI | 284039280 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.266728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAACT CTCTTCAATT GATTCTTGGT TTATTGCTGG TTGGCGGCTT CACTTCCTGT CAAAAAGAAA ACGTCGATAC CAGCGGAGCC GATGTGTTTG AAGCCGACAA GGCAATTATT CAAGATTATG CAGCCAGTAA AGGGCTTAAC GGGTCAATGA CCGCCAATGG CATATATTAC GCGCTCACCA AAGCCGGAGG TTCTACCGTA AGCCCGGCCA ACGGGCAGGA AGCAGAGTTC AGTTACACAC TATACACACT GGTTCGGGGT AGCGGTACTG CCGTAACCGA CAAGTTTGTT GATTCGACCT ATGCCACCAA GTCTAGCTAT ACCTATCTGG TGGCTACGAA TCCGGGCTTA ACGGAAGGGC TGTTCCGCAT GCGGGAGGGC GATCAGGGCG TTATCCTGTT GCCGTCTGAT TACGCCTTTG GCTCATCGGG GAGTTTGGAT GGCGCTATCC CGCCCAACAC GCCGGTTCGG CTCAACGTAA CCCTGAAACG GATACGCACT GAAGATCAGC AGATAAACGA ATACATGACG GCTAATAAAC TGACACCTAC CGAGGTCACG GTAAGCGGGC TGCGGTTTAT TAAAACAGTA ACAAACAGCA ATGGTGCGAC CCCGCTGGGC AATCAAACCC TTAATGTGCG CTACCGAGGC ACTTTGCTGA GGTCGTCGTC GGCTTTTGAC AGCACAGGCA CTGGTACCGT TGGGTTTACA CTGGGCCAGT CTGTTGCTGG TTTCGATGAA GGACTGTCCA AACTTAAAGT TGGTGAGAAA GCAACGATTA TCATGCCATC CAAAATCGGC TACGGAGCCA CGGGCCGGTC GGTTATTCCG CCCTACGCAC CCATGCGCTT CGATATTGAA CTGGTATCAG CCCAGTAA
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Protein sequence | MRNSLQLILG LLLVGGFTSC QKENVDTSGA DVFEADKAII QDYAASKGLN GSMTANGIYY ALTKAGGSTV SPANGQEAEF SYTLYTLVRG SGTAVTDKFV DSTYATKSSY TYLVATNPGL TEGLFRMREG DQGVILLPSD YAFGSSGSLD GAIPPNTPVR LNVTLKRIRT EDQQINEYMT ANKLTPTEVT VSGLRFIKTV TNSNGATPLG NQTLNVRYRG TLLRSSSAFD STGTGTVGFT LGQSVAGFDE GLSKLKVGEK ATIIMPSKIG YGATGRSVIP PYAPMRFDIE LVSAQ
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