Gene Slin_4419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4419 
Symbol 
ID8728179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5355675 
End bp5356328 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID 
Productdeoxyribose-phosphate aldolase/phospho-2-dehydro- 3-deoxyheptonate aldolase 
Protein accessionYP_003389199 
Protein GI284039269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATC TCTTTCCCTA CATAGAGCGG ACGCTGCTGC ATCCAGACGT GACCATCAAC 
GAGCAATACG ATGCGCTCGA TGAGGTTGTC CAGTTAGGCA TGGCTGGCCT GACAGTGGCT
CCCTTCTGGG TCAAGAAGTT TCGGCGGGAA ATGGGCGATA CACATCCGGC CATGCTGTCG
ACCGTAATCG GGTTTCCATT CGGTTACCAG CGTACCGAGG CCAAACAAAC CGAAATAGAG
TGGGCCCTGC GCGATGGTGC CACCGAAGTA GAAGTCGTCC TGAACACGTC GGCTCTGTTC
TCACCAACGT CTGTCTGGTT GAAAATTGAA CTGGCCAAAC TGGTGGCAAT GGTTCATGCT
CAGGAAAAGT ACCTGACGAT TATTCTGGAA TCGTCGCTGC TCGATGATGA GCAACTTCAG
AAAATGATTA AGCTCTCTGC CGATGCTGGG GCTGATTTTA TTAAAAATAC TACGGGCTTT
GCGGCCGGTC AGAACGGGGT GTCTTACCAC CACGAATCGG CCTTGCGGTT CCGTCAACTC
GTCCCCAAAT CAGTAGGTGT CAAGATTGTA GCCGATGGAG CAACGGAGTT TCAGTTGGAA
GACTTAGTTG CGGCAGGTGT AGAACGGCTG TCGATTCGGC GGCTGGATTT GTAA
 
Protein sequence
MNHLFPYIER TLLHPDVTIN EQYDALDEVV QLGMAGLTVA PFWVKKFRRE MGDTHPAMLS 
TVIGFPFGYQ RTEAKQTEIE WALRDGATEV EVVLNTSALF SPTSVWLKIE LAKLVAMVHA
QEKYLTIILE SSLLDDEQLQ KMIKLSADAG ADFIKNTTGF AAGQNGVSYH HESALRFRQL
VPKSVGVKIV ADGATEFQLE DLVAAGVERL SIRRLDL