Gene Slin_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4397 
Symbol 
ID8728157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5332855 
End bp5333766 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389177 
Protein GI284039247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAT ACCTGCTATT TACGCTCCTG ATAAGCGTAT TTCTGAGTTC GGAAGGTTGT 
CGACGTCAGC GTATGTCGCG CAATACTGGC CCGACGCCGG TTTCATCCGC CCCCACCCCT
GCCGATTCAA CTCTTGCGGC TAATCCGGCA CCAAAACTTC CTGCCGACTC TGCACAGGTA
ACACCCGGGT CATCAAAACC GGACCTATCC AGGCCGGACC TATCCAGGCC GGGCATCGAA
GAGGCTCGAG CCAATGTTGC GGAAATCGAC TTTCGATATT TGACTGCCAA ATCCAAAATC
TCGTTTAAAG GACAACAGCA GGATATCGAC AATGCCAATG TGAGTATCCG GGTCCGGAAA
GACAGCCTGA TTTGGGTGTC GGTGTCCAAA CTCGGGATCG AAGCCGTTCG GGGCATAATC
ACCCGTGACT CAATCCTGAT TGTCGATAAA ATACACCGTG AATACTCTGT CTACGACTTT
CCGACACTGA GCAAACAGTT TCATTTTAAC CTGAGCTTCG ATCTGCTTCA GGCGTTGATT
GTGGGTAATC TGCCTTTACC CAAACGACCG GCCCAAAAAA TAAAGAATGA GCGAGATTAT
CTGCTGCTAC GGCAAAGTGA GGGCAAAGTG CTGGTTGAAA ACTACATTGG CGAGAACGAC
CGAAAGTTGA AGAAACTAAT GGTGACCGAG CAGCCAACAA AAAATACGCT TCGGCTGGAT
TACGAAGATT TTACCTCACT CAATAACTTT CTCTTTCCCT ATACCAGCCT GGTTACCGTC
GATTACAAGT CAAAGTCTGA CGGACAATTT TACCAGACAC TGCTGCGTAT CAAGCATAAC
AAAGTTGAAC TGATCGATAA GACGCCAGGA TTCCCCTTTA CCATTCCGGC CAATTATACC
CGTCGACCTT AA
 
Protein sequence
MNKYLLFTLL ISVFLSSEGC RRQRMSRNTG PTPVSSAPTP ADSTLAANPA PKLPADSAQV 
TPGSSKPDLS RPDLSRPGIE EARANVAEID FRYLTAKSKI SFKGQQQDID NANVSIRVRK
DSLIWVSVSK LGIEAVRGII TRDSILIVDK IHREYSVYDF PTLSKQFHFN LSFDLLQALI
VGNLPLPKRP AQKIKNERDY LLLRQSEGKV LVENYIGEND RKLKKLMVTE QPTKNTLRLD
YEDFTSLNNF LFPYTSLVTV DYKSKSDGQF YQTLLRIKHN KVELIDKTPG FPFTIPANYT
RRP