| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4309 |
|---|
| Symbol | |
|---|
| ID | 8728069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5215927 |
|---|
| End bp | 5217177 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003389090 |
|---|
| Protein GI | 284039160 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.147931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0295343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGTCA TTCGCTTGTT GATTATCATT CTGGCGATCT TTTTGCCGTT TCGGGCGCAA
AGTCAGGGCC ATCCAGCCAG AGCTGGGGTG CAGTTCCGGT CGGGGACTTT TCAATCAGCC
CTGGCTCTGG CCAAAACCAT GAACAAACCC CTTTTGGTGG AGGTCTATCT CACGGGTTGT
CCACACTGTG AGGCTCTGGC CCCGGTTTTA GCCGAAAAAG CAGTAGGGGA TTATCTGAAC
GCTCACTTCG TGAGCTGGCA GGTGGAAGCG AATGCGGTTG AATCGGTGGC CCTGCAAAAG
GAGCAGAGCA TTGCTTATCC TGAATTTCCG TTATTCCTTT TTTTCGATCC GGCGGGTAAG
CTGATCCATG TGGGTACGCC CGCGGAACAA CCCACTCGGT CGGCGTTCAT TGAGGAAGTT
ATTTCCATTG GGCGCGTTGC TCTGGAGCCC TCCCGTCGGA CAGAGGGTTA CGTAGCCCGC
TTTGCCGCTG GTGAACGGGA TTTGTCTTTT CTGATCCAGT ATGGCAAGTA CGCTAAAACC
CGGAGAGATA ATGCGCTGTT GCATACCATC AGCGATGCCA TCGGCCACCA ATTGCTCTCC
CCTGAGCAGA TTCAAAGTCC CCCTGGGTTT TACTGCCTAC AGCGGCTGAT CGATGATGTA
GATAACCCGG CTGCGGTCTA TTTTTTTCAG CACCTAAGTG CATTTACTAT GAGCTATCCG
GTCAAGGACG TCAAGGAAGC GGGTGAAAGT ATTGTGTTTC GTTCGTTATA TGGCGTTAAA
AGTGATCAGT ACCCGGCTCA AAAAATTAGT CAGATGCGGG CCTATATGGT GGCCTTAGGG
GTGCCGACTC AAGAGGCTGC CTCTCGGACA TTACTAAAAG AGCTGGATGC TTATCTGCGA
ACAAAAAACA TGCAGGGAGC CTTGCTGCGA TTCAATGACT ACCGACGCGA GAATTCTTCC
ATCGGTCTGG CTGACTACGC CTATCTGATG CACTATTTTA ATGAGAAAGC AACGGATGAT
ACCTACCTGT CCGAGATGCC GGTATGGGCC AGCGCTGGTT TAAAGACCCT ACCCGCTGAA
CAACAGAATG CGCCACAAGT TGCCGATATT TACTATGAGC TAGCGGTTGC CTACCATAAA
ATGGGTCAAA ACGCGAACGC ATTAAATCAG GCTCGGCAGG GACTCAATAT TGCCCAAAAG
GCTAAGCTCA ACACTCAGCG CTTTGTGGAT CAGGTAGCTG CCTATCAGTA A
|
|---|
| Protein sequence | MLVIRLLIII LAIFLPFRAQ SQGHPARAGV QFRSGTFQSA LALAKTMNKP LLVEVYLTGC
PHCEALAPVL AEKAVGDYLN AHFVSWQVEA NAVESVALQK EQSIAYPEFP LFLFFDPAGK
LIHVGTPAEQ PTRSAFIEEV ISIGRVALEP SRRTEGYVAR FAAGERDLSF LIQYGKYAKT
RRDNALLHTI SDAIGHQLLS PEQIQSPPGF YCLQRLIDDV DNPAAVYFFQ HLSAFTMSYP
VKDVKEAGES IVFRSLYGVK SDQYPAQKIS QMRAYMVALG VPTQEAASRT LLKELDAYLR
TKNMQGALLR FNDYRRENSS IGLADYAYLM HYFNEKATDD TYLSEMPVWA SAGLKTLPAE
QQNAPQVADI YYELAVAYHK MGQNANALNQ ARQGLNIAQK AKLNTQRFVD QVAAYQ
|
|---|
| |