Gene Slin_4190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4190 
Symbol 
ID8727949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5047604 
End bp5048791 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388974 
Protein GI284039044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACGTG CCACTAAAAT TTTCATTGCC CTTGTCGTTC TGCTGATCAT TGCCCGATTG 
TTGCTGCCCT ACTTTGTTTT GCGGTATGTC AACAAGACGT TAGCCGACAT GGGGAGCTAC
ACAGGCCACG TCGAAGACAT TGATATTCAG CTCATTCGCG GAGCTTACCA GATTGATGGA
CTCCGCATCC GCAAAATCAA TGGCAAGATA AAAGAGCCGT TTATCTACAT CCCCAAAACC
GATTTATCCG TCGAGTGGAA GTCGCTGTTC AAGGGAAAAC TGGTCAGTGA AGTAGAATGC
TACGAACCCG AAGTGAATTT TGCGTTCAGC GAAAGCGAAG CCAGCAGCCA GACCGGGGCC
GATGTAGACT GGACCGCTTA CTTAAAAAAG TTGCTACCCA TCAGCATCAA CCGGTTCGCC
ATAATTAATG GCCGAGTCGA CCTGACCAGC CTGGTTACGC AACCCCGCGC CGATCTGTCC
ATCCGGAAAC TACAGGGCGA AATCCGGAAC ATTCGGAACG TGGAGGATAA GAATAAGAAA
CTCCCCTCGC CGGTTGTGGC ATCGGGCGAT GTACCCGGCT ACGGCGGCAC CATGAATTTT
TCGGCAAATA TGAATTTGCT GAAAGAGATG CCGGATTTCG ACTATAATCT GCGCTTCACC
GACCTCCAGT TGGTAAAGCT CAACCCGCTG GCAAAAGCCT ACGCTAATCT AGACTTTGAG
CGTGGAACGG TCAGTGTGTA TAGTGAGATG GCCATGCTCA ATGGCAAGCT GAACGGCTAC
CTCAAGCCCC TTACCAAGGG GATGCAGATT TTTAAACTCA ACGAGCACGA AGGGCGTTCG
GTGGGGCGCT TCTTTACCGA ACTACTGGCC CAGGGCGGAA CCGCCATCCT TAAAAACCAG
AAACACGATC AGGTGGCTAC CCGTGTGCCG CTGAGTGGCA CAGTCGATAA CATCAAAACA
TTCGTCTGGC CAACTATTTT TGGCGTACTA CGCAACGCCT ACATCGAAGC CTTCAAAGGG
GAATTCGATA ACAACATTAC CCTGAGCGAC GCACTCAAAA ATGTAAAGGA AGACTTTAAA
GAAAAACGGG CGGAACGGAA GGCCGAGCGA AAAGAAAAAC GCGCTGAGCG AAAAGCCGAA
CGCAAAGCGA AACGAGCCAA ACGAAAGGCC GAACGCGCGA AAAAGTAA
 
Protein sequence
MKRATKIFIA LVVLLIIARL LLPYFVLRYV NKTLADMGSY TGHVEDIDIQ LIRGAYQIDG 
LRIRKINGKI KEPFIYIPKT DLSVEWKSLF KGKLVSEVEC YEPEVNFAFS ESEASSQTGA
DVDWTAYLKK LLPISINRFA IINGRVDLTS LVTQPRADLS IRKLQGEIRN IRNVEDKNKK
LPSPVVASGD VPGYGGTMNF SANMNLLKEM PDFDYNLRFT DLQLVKLNPL AKAYANLDFE
RGTVSVYSEM AMLNGKLNGY LKPLTKGMQI FKLNEHEGRS VGRFFTELLA QGGTAILKNQ
KHDQVATRVP LSGTVDNIKT FVWPTIFGVL RNAYIEAFKG EFDNNITLSD ALKNVKEDFK
EKRAERKAER KEKRAERKAE RKAKRAKRKA ERAKK