| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4187 |
|---|
| Symbol | |
|---|
| ID | 8727946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5045309 |
|---|
| End bp | 5046118 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003388972 |
|---|
| Protein GI | 284039042 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.914646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCTC AATTGCTGAC AACGGCACAA CAGCCGCTCT ATACACCGGG TGGCGATACA
CTGGGTGACG ATTACCGCGC GCTGCCCAGG ATATCGAATT CGGATTTGAC CCGGCTCAAG
GAAGAACACC TTGGGTACTG GTCGGTGCCG TCGGCGCGGT TTATTCCCGA AAAAACCAAG
GCATTTGGCC GGGCGTTTCA CCAGCACCTG CTCGAACCCG AAACGGTGGG CACGGTACTG
GCGCAATTGC TGCCTGATCT GGTTGACCCC GCAGGCCGTC CGGAACTCAA TGCGTTGGCT
CCTGCTCAGG AAAAGCAGTT GCAGACCCTG ATGCAAACCA TTCGGCAGGA CGCTTTTTGC
CGGCGTTACC TGCGGCTGTC GGAGCGGGAA CGGATTGTGC TGTCGACAGA ACCAACAACC
GGCGTGGCCT GCAAAGCACG GCTGGACATG GTGTACACGA GTCCCAAGCG CCGGAATGCG
CTTGTTATTG ACCTAAAAAC AACGTCGGCT CGCACACAGG CCCAGTTTCT GGAATCCTGC
TACACATACG ACTACGACCG GCAGGCGGCT TTTTACCTCG ACAGTCTACG TCATGCCGAT
AGCCGGGAAT GGCACACAAC GAAGCAGTTT CGCTTTGTGT TCGTTGGCAT CATGAAACAA
AGCCCGCATC GCCTGTTTGC CGTTGACGCC ACGTCGATTC CGGGATTTAT TGACTACGGC
CGGAAGAAAT ACCGCTTCTG GCTCCGCAAA TGGCGGGATG AGCAGGTTAC GGAGCAGCCA
ATGGCTTCGG CCTGGAGTAT GAGTGCCTAA
|
|---|
| Protein sequence | MISQLLTTAQ QPLYTPGGDT LGDDYRALPR ISNSDLTRLK EEHLGYWSVP SARFIPEKTK
AFGRAFHQHL LEPETVGTVL AQLLPDLVDP AGRPELNALA PAQEKQLQTL MQTIRQDAFC
RRYLRLSERE RIVLSTEPTT GVACKARLDM VYTSPKRRNA LVIDLKTTSA RTQAQFLESC
YTYDYDRQAA FYLDSLRHAD SREWHTTKQF RFVFVGIMKQ SPHRLFAVDA TSIPGFIDYG
RKKYRFWLRK WRDEQVTEQP MASAWSMSA
|
|---|
| |