Gene Slin_4130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4130 
Symbol 
ID8727889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4979309 
End bp4979698 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content45% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003388916 
Protein GI284038986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0725574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATC TTACACCTCA AAATCGCATC GATGTTCCAA TCGGACGAGA AAGAGTTAGT 
TTCCTTCGGG TTAACGACAC TAAGTTAGGT TGGCAGACCC GCCCTATCAA AGATCTGGTT
CTTATCAAAG GAGTACGTGG CTACAGCTGG TTGCAATGGT CCGACGGCAG TAAACAAATG
ATGGCTTATA CCATCAAATA CTACGTCAAT AAGTTACCTG AGAGCGACTT TATTCGGGTG
CACCAGAATT GCATCGTAAA CCGAAATCTT ATACAGAAAG TCCTGATAAC ACACCGGGGG
CCGTTTGTGC GGCTGATTAA TGGCGACGAA ATCGTGATTT CCCGTCGGCG ATGGATGGTA
ATAAAGCGCG ATCTGTTGAA ACAGTCGTAA
 
Protein sequence
MIDLTPQNRI DVPIGRERVS FLRVNDTKLG WQTRPIKDLV LIKGVRGYSW LQWSDGSKQM 
MAYTIKYYVN KLPESDFIRV HQNCIVNRNL IQKVLITHRG PFVRLINGDE IVISRRRWMV
IKRDLLKQS