| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4114 |
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| Symbol | |
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| ID | 8727873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4955178 |
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| End bp | 4955468 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | PAAR repeat-containing protein |
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| Protein accession | YP_003388900 |
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| Protein GI | 284038970 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.916002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00152888 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCTCCAG CCGCCCGTTT AACCGATATG CACACCTGTC CGATGACGAC GGGGCCCGTA
CCGCATGTGG GCGGCCCCAT AGTGGGGCCC GGTTGCCCGA CGGTGATGAT CGGGGGCTTG
CCAGCTGCTC GTGTTGGCGA TTCACTGGTG TGCGTCGGAC CACCCGATAC AATCGTTAAA
GGCTCTGCAA CGGTACTTAT TGGTGGGGCA CCGGCAGCCC GAATTGGTGA TTCGACCGGC
CATGGCGGTA CTATTGTGCT CGGTTTTCCA ACCGTTATGA TTAATGGTTG A
|
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| Protein sequence | MPPAARLTDM HTCPMTTGPV PHVGGPIVGP GCPTVMIGGL PAARVGDSLV CVGPPDTIVK
GSATVLIGGA PAARIGDSTG HGGTIVLGFP TVMING
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