| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4090 |
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| Symbol | |
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| ID | 8727849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4924629 |
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| End bp | 4926104 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003388876 |
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| Protein GI | 284038946 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.291597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0803273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGGCA AGAAGATAGG ACAGAACTTT TTCATTAGTA TCATATCAAT GGGCCTGGGT
ATCCTGAGCT CTGTATTTAT TGCCCGTATT GGCGGACCAA CCATCATGGG CAATATCGGG
CTGGCCATGT CTTTCCAAGT TTTGGTGAAG TCGATATTTA CGCATACCGT TAACAGCGTT
CATTTGAAAA TGTACAATGA AAACAACCAG ATAGGGCTCA AGAACTACAT GGTTGTTTTT
GTGTTGTATA ATGTCCTCAC ATCGTTATTG GTTTTATCCT TTGTTCTCTG GAATCACTTT
AGTCACAACG GCACCTTTAC CGATCTTCAG ATCTCACTGA TTGTCATTTT TATCCTCCAG
GATTACTTAA TGACGCCCTT TTATATTTAC ATAACGGATC AATCGTCGAA ACTCAATATT
ATCAGGTCCA ACATGACTGA TTTTTATGCT CAGACGCTGA TCAATATTGC CAAAATTGCC
GCCGTTCTGC TGGGAGAATC GGAAATTGGG ATTGCCTGGT ACATTATGGC AGCTTGCGCG
TTAAGCTCTG TTTATCCACT GATCAATTTG ATCCGGTCGG ACTTTGGCAC CTACTCCCTG
GCGGTTGTAA AGAAGTACAT CCGTTACTCC ATGACGATTT CCACATCTAC GATTGCCTAC
GGATTATTGG TCAGCTTCGA CAAAGTACTA CTGGGGCTTT ACCAGGTTTC GCCGGAGCAA
ATTGGCTTTT ATAACGTGGG AAACCGACTC GGGCTGCTGC TCATGACCTT AGGCATTAGC
ATTGGCAGTA TTCTGTTATC GGTTTTCTCT AAGAACGCAA CGGACAACAA CAACGACAAA
ACGATCAGCC AGTTAAGCAG CTATGAACGA TTCATCACCA TCAGCTTCTT ACCGGCGGTT
CTGGCCGCTT CGCTGTTCGG CAACGAGTTG ATCACACTGG TTTTTGGCGC CCGCTACCTC
GAAGCATTCC CGGTGCTGAT TCTGTCGATT CTGTTCGCTT ATGTCAAAAT ATTGACCATT
CCCTACCAGA ACTACTTATT TGCCAATAAC AGCTTCAGGG CGTTTAACCG CAATTCGATC
CTATTCATTG TGGCTATTGT CTTTTTCTCA ACTACAATGG CCTATTTCAA TTTCTTCAAT
GATCTGCCGA TTTCCGTTGC CGTTGCCCTG TTGCTGGCCT GTCTGCTTGA GCGTGTGCTG
TTCACCCGCG ATGCCGCCAA AATAGACCCC CAGATTCGGC TGTTCTTCCA TCCAGGAATG
ATGCTTTTCT TCACCGGCAT CACCGTGGGC TGGTTTGTTC TGGATGAATT CATACCCGCT
ACCAACTACC TGCTGAGCTA TGGAATTCGT GTGGTGATTT TGCTCGGTCT ACTACCAGTC
GGCTACCTTT TGGGAATATA CACCAAAGAT GACTTCTACA TGATTACTGA TCTATTGAAC
ATACCGACTG GCAGGAAAGC AGTCTCACAG GCGTAA
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| Protein sequence | MLGKKIGQNF FISIISMGLG ILSSVFIARI GGPTIMGNIG LAMSFQVLVK SIFTHTVNSV
HLKMYNENNQ IGLKNYMVVF VLYNVLTSLL VLSFVLWNHF SHNGTFTDLQ ISLIVIFILQ
DYLMTPFYIY ITDQSSKLNI IRSNMTDFYA QTLINIAKIA AVLLGESEIG IAWYIMAACA
LSSVYPLINL IRSDFGTYSL AVVKKYIRYS MTISTSTIAY GLLVSFDKVL LGLYQVSPEQ
IGFYNVGNRL GLLLMTLGIS IGSILLSVFS KNATDNNNDK TISQLSSYER FITISFLPAV
LAASLFGNEL ITLVFGARYL EAFPVLILSI LFAYVKILTI PYQNYLFANN SFRAFNRNSI
LFIVAIVFFS TTMAYFNFFN DLPISVAVAL LLACLLERVL FTRDAAKIDP QIRLFFHPGM
MLFFTGITVG WFVLDEFIPA TNYLLSYGIR VVILLGLLPV GYLLGIYTKD DFYMITDLLN
IPTGRKAVSQ A
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