| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4074 |
|---|
| Symbol | |
|---|
| ID | 8727832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4902380 |
|---|
| End bp | 4903399 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003388860 |
|---|
| Protein GI | 284038930 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.545411 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTC TGTACTTGTT TAGATGTCCT GGTTCCGGAT ATAGCCTTGA GTACTTGTTT
GCTGGCATAC GCACTGAAAT GGCCACCTGC GGCCTGCAAA CGATGGCTGT TCATTTGCCC
CACATCAGTC GGGGGGTGCG TAAGGTCTGG CAAAACCTGC GTTTTGTGAA GCAGCTCACC
GCCGACGTTT TTCACATCAC CGGCGATGTG CATTATGCCG CCCTTGCCTT ACCCGCGTCC
CGAACGATAC TCACCATTCA CGATTGCTTT CTGCTGGAGC ACAACCGGCA TCGTCCGCTT
CGCTATGCCG TTTTCTGGCT GCTCTGGTAC TACTTACCCA TTCGTCGGGC CGGGGTTGTA
ACTGCCGTGT CGGAAAAAAC CAGGCAGGAG CTGATACACT ACGTAGGCCG TGTTGCCCGG
CATGTACAGG TCATTCCCAA TGGCTATGAT CCGGTGTTCA AACATAGCGA GAAACCCTTT
TGCCATACCC GGCCCACTCT GCTACAGATT GGTACCGCAG CCCATAAAAA TGTAACCCGT
TTAGTAAAGG CAATTGAGGG AATCTGTTGT ACCCTTATTC TGGTCGGCCC GCTATCTTCC
GACCTGCTGA GTGAACTCGA CAAGCGCGGC ATCACGTACC GGAACTATGT CGATCTGAGC
CGGGCTGACA TCATTCAACT ATATGCGAAT TGTGACATTG TCACCTTTGT CTCGACTTAC
GAAGGATTTG GTCTGCCCAT TCTTGAGGCC AATGCCGTTG GGCGGGTGGT TCTTACATCC
GATAGGTCGC CCATGCGGGA GGTAGCTGCC GACGCGGCTC ACCTGGTTAA TCCAACGGAT
ACCGACGCCA TTCGCCAGGG TGTTTTACGG CTCATCCGGG ACGACCGTTA CCGCCAGCGT
CTATTAGACA ATGGTCGGCA AAACGCCCGG CGATTTACTA CCGCCCTAGC CGTTCAGCGC
TATCGGGAAG TATATAATGA CGTCAGTTTC GCACACGGGT CAACGCCTTC GTTCTCATGA
|
|---|
| Protein sequence | MTVLYLFRCP GSGYSLEYLF AGIRTEMATC GLQTMAVHLP HISRGVRKVW QNLRFVKQLT
ADVFHITGDV HYAALALPAS RTILTIHDCF LLEHNRHRPL RYAVFWLLWY YLPIRRAGVV
TAVSEKTRQE LIHYVGRVAR HVQVIPNGYD PVFKHSEKPF CHTRPTLLQI GTAAHKNVTR
LVKAIEGICC TLILVGPLSS DLLSELDKRG ITYRNYVDLS RADIIQLYAN CDIVTFVSTY
EGFGLPILEA NAVGRVVLTS DRSPMREVAA DAAHLVNPTD TDAIRQGVLR LIRDDRYRQR
LLDNGRQNAR RFTTALAVQR YREVYNDVSF AHGSTPSFS
|
|---|
| |