| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3942 |
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| Symbol | |
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| ID | 8727700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4724045 |
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| End bp | 4725736 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003388731 |
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| Protein GI | 284038801 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.171262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.567153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTA TTTTTTGGGT ATTGATCCCG TCACTTTTTT TAACTGCCTT TTTTGTTCTC
AAGCCCTACT CCGTTTCTGA AACGGGCACA AGTATCGCCA TGTGTGGGTC TGATGCCAGT
GGCCGTATCA GCCAGCTGGA AAATGGGAAG TTTATGGTTC CCCTGCCGGG TTGGGGAGAT
CATTCGTATG TGATTTCCAC CCGGTCGGAC AGTGCGCAGT TTTACTTCAA TCAGGGTCTG
ACGATGTACT ACAGCTACCA CATGAAGGAA GCGATGGCTT CGTTTAAAGA GGTGGCCCGT
CTTGACCCTA CGTGTCCGAT GGCCTGGTGG GGTCAGGCAT TGGCCGGAGG CCCTTATTAC
AATGCGGCCC ATACATACAC CGTTCCCGCC GATATGCCCA CTATTCTGGC TCGCATGAAC
GAACTGGCAT CGAATGCCAC CGCGAAAGAG AAAAGGCTGA TTCAGGTGAT GAACACCCGA
TACGCGACAG TTGGGGCCGG GGAAGACCGA AAAAACCTCA ATGAAGCCTA CGCATCGGCA
ACGAAAGAGT TGATTACCGA ATTTGATGAC CCGGATATCA AAATGCTGTA TGTAGATGCC
ATTATGCTGA TTCATGCCTG GGATTTCTGG ACACCCGATG GAAAGCCCAA AGCCTGGACA
CAGGAAGTAG TCGACCTGAC CGGGGCTGTA CTGAAGCAAT ACCCGAATCA TCCGGCAGCG
CTGCATTACC AGATCCACCT AACTGAAGCG TCCCGACAGC CCGAAGTGGC CTTAACCAGT
GCCGATAAGC TCAAAACACT GCTGCCCGGC GTTGCGCATA TGGTTCACAT GGCGAGCCAC
GAATATCAGC GAAACGGTCT TTTTGAGCAG GGTGTACAGG TCAACGACAA AGCCGATGCC
AATTTGTTGA TCTACGATTC GCTGGCGGCT CATCTGAATT TGGTAAAGCA TTCGCCCCAT
TATTTTGCCG TTCAGACCTA CTGCGCGCTG TCGGGAGGGA TGTACGAAGT TGGCTTGAAA
GACGCCCTGC GCTGCCGAAA ATCCGTCTCG CCGGTAGCCG GGAATACCTA CGATCAATAC
CTGTATATGC TACCCTCGCT GACGCTGGTG AGGTTGGGTA AATGGAACGA GATCTTGGCG
GCACCGAAGC CGCAGAACGA CTGGGCCTAT GCCATGCTGC TGGATCATTT TTCACGAGGC
ATGGCGCTGG TAGCCCTCGG AAAAACGGCG GAAGCTCAGC ACGAGTTGAC ACGGCTTCGG
GAGCGGTTGA GTGACCCGAT TCTTGAAAAA CGACGTATTC CTTTCAATGC GCCCTTGCCC
GTGGCCCGCA TTGCCGAACA TATTCTGGAC GCATCCCTGC TTTTCTCTCG AAAGGCGCAT
GATCCGGCTT TTGCGGCCCT CGATCAGGCT ATCAACCTGG AAGATCAGTT GATTTATACC
GAACCCAGTG ACTGGCCGCT GCCAGCCCGG CAGTTTTTAG GCGCTTATCT GCTTCAACTG
AAGAAAGCGA AGGAAGCTGA AGTCGTGTAT CGTGAGGATT TGGCGCATCA TCCGGGCAAT
GGCTGGTCGT TGGTTGGCCT TCATAAAGCG CTTGCCCTCC AGGGGAAACG GGCCGAACTG
GCGAGAATCG AGGCTGGCTA CAAAACCGCT TTTTCAAAGG CCGAGCAAAT GCCGACATCG
TCTATTTATT GA
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| Protein sequence | MKAIFWVLIP SLFLTAFFVL KPYSVSETGT SIAMCGSDAS GRISQLENGK FMVPLPGWGD
HSYVISTRSD SAQFYFNQGL TMYYSYHMKE AMASFKEVAR LDPTCPMAWW GQALAGGPYY
NAAHTYTVPA DMPTILARMN ELASNATAKE KRLIQVMNTR YATVGAGEDR KNLNEAYASA
TKELITEFDD PDIKMLYVDA IMLIHAWDFW TPDGKPKAWT QEVVDLTGAV LKQYPNHPAA
LHYQIHLTEA SRQPEVALTS ADKLKTLLPG VAHMVHMASH EYQRNGLFEQ GVQVNDKADA
NLLIYDSLAA HLNLVKHSPH YFAVQTYCAL SGGMYEVGLK DALRCRKSVS PVAGNTYDQY
LYMLPSLTLV RLGKWNEILA APKPQNDWAY AMLLDHFSRG MALVALGKTA EAQHELTRLR
ERLSDPILEK RRIPFNAPLP VARIAEHILD ASLLFSRKAH DPAFAALDQA INLEDQLIYT
EPSDWPLPAR QFLGAYLLQL KKAKEAEVVY REDLAHHPGN GWSLVGLHKA LALQGKRAEL
ARIEAGYKTA FSKAEQMPTS SIY
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