Gene Slin_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3924 
Symbol 
ID8727682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4707515 
End bp4708618 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388713 
Protein GI284038783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.152622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.197428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCA TGAAACATAT ATTTTTTTGC CTATTCTTAG TTGGATTAGC GCAGCCCATA 
CAGGCTCAGT TGTCTACCCC GGCTCCGACC TCCAAACGGA TTGAAGTAAC GGTCCATCCG
GGCATTGAAC TCTTTACAGT GGTACAACTG CTGGCTGGTC AGTACAAAAT GCCTAACCCA
TCAGCCTATG CCAAAGCAGT TGAAACCTAT TTTAAGCCCT ATGCGAAACA CCCGGCGGTG
GAGCAGGTAA AAAAGATGGG CCGGGTTTAT GCCGATCTGG CTGAACTTGG CTACTGCTTT
GATGCATTCC CGGCCATCCG GATTTATTAT CCAGACAGCC TGCACTGGTA TAAAAAGTAT
GGCAAAGACA CCGTACAAAC CTATATGAGG CTGTGTAAAC AATTCGCCCA GGAAACGAAA
TTCTGGGACT TCTACCAGCA GCACCAGCCC GATTACAAGG CCTGGGCTAC ACCCGTGCAG
CAAGAACTCA CGCAGAAAGG ATGGGTGGCT AAGCTAGACT CCTTTTATCG ATTTGACGGC
CACACCAACT GGACGATTTG CCTGGACCCG CTCAACAGTT GGGGGGCGCA TGCGATCATG
ACCAAAACGA TCAACCCACG GTATGCAGAC CATGTGGTGT ATAATGTTGG CTTCTTTGAC
CAAAACGCAA AAGATACAGA CGCTCCTACC TTTATAATTG GTTCAGAGCC GGTCTCGATG
GTCTGGCATG AGGGGAGTCA TAGCTATACG AATGAGTTGC AGAAGCGATA CGCGACTGAT
ATTGCCAAAC TAACCTATCT GCTGAATAAA GGCGATGAAG GTATGAAACG GAATAATATC
AACACCTGGG CGCATTGTTT CGATGAGAAC CTGGTCCGGG GGATTGTTAT TGCCCTCTTT
CGTCAATATC GCAGCCCTAA AGAAGCCCGT AAACAGGCCG CCCGCGAAAT AGTCGGTGAT
TTCCTGTACG CAGAAGACAT TGCCGATGTG CTGACGAGTA ACTACATCGG CAATCCTGCC
TACGTCAATT TTTCTCAATT CTTCCCGCAA ATCCTGACGT ACTTAGCCCA AAAATATCCG
AATAGGCAAC TGACTGATCG ATGA
 
Protein sequence
MSAMKHIFFC LFLVGLAQPI QAQLSTPAPT SKRIEVTVHP GIELFTVVQL LAGQYKMPNP 
SAYAKAVETY FKPYAKHPAV EQVKKMGRVY ADLAELGYCF DAFPAIRIYY PDSLHWYKKY
GKDTVQTYMR LCKQFAQETK FWDFYQQHQP DYKAWATPVQ QELTQKGWVA KLDSFYRFDG
HTNWTICLDP LNSWGAHAIM TKTINPRYAD HVVYNVGFFD QNAKDTDAPT FIIGSEPVSM
VWHEGSHSYT NELQKRYATD IAKLTYLLNK GDEGMKRNNI NTWAHCFDEN LVRGIVIALF
RQYRSPKEAR KQAAREIVGD FLYAEDIADV LTSNYIGNPA YVNFSQFFPQ ILTYLAQKYP
NRQLTDR