Gene Slin_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3875 
Symbol 
ID8727633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4650786 
End bp4651412 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content53% 
IMG OID 
Productputative urease accessory protein 
Protein accessionYP_003388664 
Protein GI284038734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGG TATTTCCCCT TTTTCTGGCC CTAAGCGTTG GTTTTGCCCA CGCGTTTGAA 
GCCGATCATT TAGTGGCTGT CAGTACCATT GTCACCCGGC GAAACAATAT CTGGCTGGCC
TTAAAAGACG GCGTCTTCTG GGGATTGGGC CATACGTCCA CCATTCTGCT GATCGGCAGT
ATTTTTATGC TGGGAAAGTT TGCCCTTCGT GCGGGTGACT TTCGCTATCT CGAAGCGGGG
GTTGGCGTGA TGCTCGTTAC ACTGGGTGGC CTGCGGCTCT ACAAATTGAC GGTATTCCGG
GAAGTAGCGG ATGCACATAG CCGTGTCCAC GAAGGACACG CGCACCGATT AGCTTACGGA
GTTGGCCTGA TACATGGGCT GGCGGGTAGT GGCGCGTTGA TCCTCTCTGT GCTGACGCAA
ATAAAGAGCA CAGGCGCAGG CATGATCTAC CTCGGGCTGT TTGGTATTGG CTCCATCGCG
GGTATGATGG TAGCAGCTAG CGCATTCAGC GTACCGTTTT CTGTTCGCAT GGCAACCAAC
CCATTGGTTC GCACTACGCT GGTTGTAGTA TCGTCGGTGA TTTGTATTGG CCTTGGTGCC
ACGGTTATTT ATGAAAACGC AATGTAA
 
Protein sequence
MQTVFPLFLA LSVGFAHAFE ADHLVAVSTI VTRRNNIWLA LKDGVFWGLG HTSTILLIGS 
IFMLGKFALR AGDFRYLEAG VGVMLVTLGG LRLYKLTVFR EVADAHSRVH EGHAHRLAYG
VGLIHGLAGS GALILSVLTQ IKSTGAGMIY LGLFGIGSIA GMMVAASAFS VPFSVRMATN
PLVRTTLVVV SSVICIGLGA TVIYENAM