Gene Slin_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3780 
Symbol 
ID8727538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4545052 
End bp4545600 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388574 
Protein GI284038644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.41238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.142422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATT CAGACTACCA ACAACTGTTC GACCAGATCC TTAGCAGCCC TCCGGTTGAC 
GATCCCTATA CGGACCCGAC GTACTGGCAG TATACCAAAC TCAATCAGGT TCGTATGAAG
CGTTGGGATA AGCAATTGAT CCTGCCAAAA GAGCTGGCTG AGGCCATCAA ATCGCTCACC
AGCCCCCAGC ATTGGATGAT CATTACCGAG CCCTGGTGTG GCGATGCAGC GCATATCATC
CCGTTTTTGA TCCGATTAGC AGCCCTCAAT GAACTAATCA CCTACGCTAT TCAACTACGC
GACAGACCCC CTTTTCTGAT TAACTCCTAC CTGACGAAGG GCAGCAAAAG TATTCCTAAG
TTAGTGGTTC GGGATCAGAA CGGATCTGAT GTGTTCTGCT GGGGACCCCG TCCCAAAGCG
GCCCAGCTGT TGGTCGATCA CTTAAAGGCA TCCGGGCTTG GCCAGGACGA CCTGTCAACG
GCCCTGCAAC AGTGGTACAA TCAGGATAAA GGCGTATCGA TGTGTCAGGA GTTATTAACC
TATTATTGA
 
Protein sequence
MIYSDYQQLF DQILSSPPVD DPYTDPTYWQ YTKLNQVRMK RWDKQLILPK ELAEAIKSLT 
SPQHWMIITE PWCGDAAHII PFLIRLAALN ELITYAIQLR DRPPFLINSY LTKGSKSIPK
LVVRDQNGSD VFCWGPRPKA AQLLVDHLKA SGLGQDDLST ALQQWYNQDK GVSMCQELLT
YY