Gene Slin_3760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3760 
Symbol 
ID8727518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4523410 
End bp4524498 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content55% 
IMG OID 
Productcatalase 
Protein accessionYP_003388555 
Protein GI284038625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTG TTACGTATAG CCCGCAGGTT GAACAGCCAA TTGCGGATGA AACAGCGATT 
CTGGCGCACA TTGAGCAGGT AGTTCTTGAG ATGGCCCAGG CCGCAACGGC TAAGTACGGT
CGAGCGATGC ATGGTACGCA TGCCAAGGCG GTTGGGTTAC TGAAAGGCCA ATTGACGGTA
CTCGATGATC TGCCCCCTGA ACTCAGCCAA GGCCTGTTTG CCAAGGCGGG GCATCAATAC
GAAGTCGTGG CTCGGTTTTC ACCCGGGCCG CCAGTGCCCA TTTCGGACAA AGCGTCTGGG
CAACGGGGGA TGTCGATCAA AGTACTGGGA GTAGCTGGGG AGCATCTCGT TCAAAGCCAG
GAAAAGACTA CTCAAGACTG GGTGTTAGCG GTTGATAAGG CATTTAATGC AGCTGATGCC
CGAGCCTTTC TAAAGTTCTT CCAGTTTCCA GCCGCCAAGT CGCCTGCTAT TCCTGAAGGG
GTTATTGTGG CCGGTTCCCA AATCGCCCGT GATCTGGAAG CGGTCCTGGA GAGCGTGGGT
CTGGAAAGCC CTAATTTAAA GTTCTTTGGC CGACCACCCC GCCACCCCCT GAGTGATAGT
TACTACAGTC AAGCGGCAGT CAGATACGGG AAGTACATTG CCAAACTGGC GGTATTTCCC
TCTGCGGAGC TATTGGCCCT CATTGGCGAA CCGGCCCTAG AGGTAACGGA GGATGAGGCC
TTGCGCCACG CGATGAATGA CTATTTTGCC GACCACGAAG CGCAGTTTGA CATTAGGGTT
CAACTTTGTA CTGACTTGAC GAGCATGCCA ATTGAGGATA CCTCCGTCGA ATGGCCCGAA
CGGCATAGTC CTTACCGAAC CGTAGGGCGT CTGGTTTTAC CTCGGCAACG GGCCTATTCG
GAAACGAAGC GAGCTGAGTT CGATGAGCGG CTGTCGTTCA ACCCGGCCCA TGCCCTCGTG
GAGCATCAGC CCTTAGGCTC GGTTATGCGG GCTCGGATGC AGGTTTACGC GGCCACTCAG
CGGTATCGGC AGACCACGAA CCAAATCGAC GCGTTGGAGC CTCATCATCT ATCTGACTTA
CCCGATTAG
 
Protein sequence
MSFVTYSPQV EQPIADETAI LAHIEQVVLE MAQAATAKYG RAMHGTHAKA VGLLKGQLTV 
LDDLPPELSQ GLFAKAGHQY EVVARFSPGP PVPISDKASG QRGMSIKVLG VAGEHLVQSQ
EKTTQDWVLA VDKAFNAADA RAFLKFFQFP AAKSPAIPEG VIVAGSQIAR DLEAVLESVG
LESPNLKFFG RPPRHPLSDS YYSQAAVRYG KYIAKLAVFP SAELLALIGE PALEVTEDEA
LRHAMNDYFA DHEAQFDIRV QLCTDLTSMP IEDTSVEWPE RHSPYRTVGR LVLPRQRAYS
ETKRAEFDER LSFNPAHALV EHQPLGSVMR ARMQVYAATQ RYRQTTNQID ALEPHHLSDL
PD