Gene Slin_3673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3673 
Symbol 
ID8727426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4434460 
End bp4435227 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content49% 
IMG OID 
Productsignal peptide protein 
Protein accessionYP_003388478 
Protein GI284038548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC TGGCCCTACT TCTCGTTTCG GCAGCGATTC TATCAATTTC ATCTTTAAAC 
GCTCAGACAA AAAAAATGGA AACAACGAAA CCCACTATCA TCTTTGTGCA TGGCTTATGG
GCCGATGGAT CGTCTTGGAG CAAAGTTATC CCGCTCCTGG TTGCCCGAGG GTATAAAGTT
ATTTCCGTGC AGAACCCGAC TACCACACTG GAGAATGACA TTGCTGCCAC TCAACGGGCT
ATAGCTGTTG CCGGTGGCGA CGTCGTTTTG GTTGGTCATT CCTGGGGAGG TTTTGTGATC
ACTGAAGCCG GCGATCTTCC ACAGGTCAAA GCACTGGTTT ATGTGGCTGC CTACGCTCCC
GAAAAGGACG AAACCGTTGT CTCCCTGAGT GAAAAAGCAG CCCCTACCCA ACTTGCATCC
TATTTTAAGG CGGAAGGTGG GTTCGTTAGT CTTACCAGAG AGGGCATCAC GAACGTATTT
GCCAATGATC TTTCGGCTCA GGAACAGGAG TTAGTTTTTG CCGTACAACA GCCGACTTCC
CCTGACGTAT TTAAAGGAGT AGCGAGTAAA GTGGCCTGGA AACAGAAACC CTCCTGGTAT
ATTGTGGCTT CGGAAGACAA GACCATCAAT CCCGATCTGG AACGCTTAAT GGCTCAACGG
GCAAAGGCCA AAACCACCAC GTTAAAGTCA TGCCACGTAG CCATGTTGTC CAAGCCCAAC
CAGGTTCTGG AAGTGATCTT AGAAGCAGCC AATCAGGCTA GTAACTAA
 
Protein sequence
MKNLALLLVS AAILSISSLN AQTKKMETTK PTIIFVHGLW ADGSSWSKVI PLLVARGYKV 
ISVQNPTTTL ENDIAATQRA IAVAGGDVVL VGHSWGGFVI TEAGDLPQVK ALVYVAAYAP
EKDETVVSLS EKAAPTQLAS YFKAEGGFVS LTREGITNVF ANDLSAQEQE LVFAVQQPTS
PDVFKGVASK VAWKQKPSWY IVASEDKTIN PDLERLMAQR AKAKTTTLKS CHVAMLSKPN
QVLEVILEAA NQASN