Gene Slin_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3648 
Symbol 
ID8727401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4407101 
End bp4408036 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388454 
Protein GI284038524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA TATTAAATCA GTTTGGCGAA AAACCGTTGA TCCGCAAGGA AGGGGGAAGT 
CTGGTTCAGC AAGAGCACAT TAAAAAGCAG ATTTCGATCC TTGCCGAGCT TGAATCATTG
ATACCTCCGC TGCTGGAAGA TGAATACAAG CAGCTAGAAG AGAATATCAA AAATGAGGGT
TGTCGGGAGC CACTACTTGT TTGGCAACGC TCTATTGAAG ACGGCCCACA AGAAGAAGTA
CAGTACCTGT TGATCGATGG ACACAACCGC TATGGCATCT GCAAGCGAAA CAGCATAGAT
TTTAAGATAT CGCTGCGGGA GTTTACGGAT ATAGATGCGG TAAAAAATTT TATGATTGAC
AACCAGCTCG GTCGGCGCAA TCTTACACCT GAGCAAATGT CGTATCTACG TGGGCAGAAG
TACAATGCAC TCAAGAAGAA ATTGGGTAGG CCTGGCCAGG TGGAGAGCTT ACCCCTGCAT
CCCGCGTCAA AAAGCGCTAT TCTACCGAAA AAAGACCCGA TTCGTACCGA ACAGGTTTTG
GCTGATCAGT TTAAAGTAAG TCCCAAAACT ATCCGACTGG ATGCGAGTTA CGCCAAAGGG
CTCGATAAGC TGGCGGAGCC GCTTAAGAAG GAAGTGCTAG CCCGGAAAGT AAAACTGAAT
AAAGGCGATG TAATTGCCCT TGGTGATCGT CAGGAGCCGA TATCCCCAAT TGCGACCCCC
AATGAACTAA TCGCAGTTCT GAAGTCCGAT CATAGCCCTC AGCCAGCTAT CACAAGATCA
TCAGCCGATG GGCAGAACGT GAATTTACAA TATAAAGTTA GTCAAGTGGT CTCGTTGGTG
CAAAAGCTAT CTTATCCTTC GGAAAGTCTT GTCTCAACCT GCGAAGAAAT GATTCAGACA
CTACAGTCGA TTGTGAACGA ACTTAAGCGT ACGTGA
 
Protein sequence
MKKILNQFGE KPLIRKEGGS LVQQEHIKKQ ISILAELESL IPPLLEDEYK QLEENIKNEG 
CREPLLVWQR SIEDGPQEEV QYLLIDGHNR YGICKRNSID FKISLREFTD IDAVKNFMID
NQLGRRNLTP EQMSYLRGQK YNALKKKLGR PGQVESLPLH PASKSAILPK KDPIRTEQVL
ADQFKVSPKT IRLDASYAKG LDKLAEPLKK EVLARKVKLN KGDVIALGDR QEPISPIATP
NELIAVLKSD HSPQPAITRS SADGQNVNLQ YKVSQVVSLV QKLSYPSESL VSTCEEMIQT
LQSIVNELKR T