Gene Slin_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3643 
Symbol 
ID8727396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4402750 
End bp4403340 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content44% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388449 
Protein GI284038519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATT TAGTGCAGGA CATATTCGAA AAAAAAGATG CTCAGTTAGG GATTAATCAG 
TCGTTGAAAG CTCAATTACA GACGATTTAT ACCACCGATC AACAGCCACG CTCCCGTATC
GATTCCCTTA TACGTGTCTA CGGGCAGAAC TCGCCTCAAC TGCAGCAACT CTGGCAGTCT
ATCCACCGGG AAGATTCTAT CAACTTGGTT AAGATCGAGC AGATTATCCG GCAATATGGA
TACCCTGGCC GACGTTTAGT GGGGGCTAAA CTAGCTAATA CGGCTTGGTT AATCATTCAG
CATTCACCCT TAGCAATTCA GGAGAAGTAC TTCCCTCTTA TTGAACAAGC CGCCAATCAG
GAGGAGATGT CAAAAACAAA TATGGCGCTA TTGATTGATC GGATTCGCGT GTACAAAGGG
CAGAATCAGC TATATGGTAC TCAAGTTAAG ATTGAGTCAA CAGGTCAGAA ATCCTTTTAT
CCAATTGAAG ACCAGAAAAA CGTGAATAAA CGCCGGTCTC AAGTCGGATT AGATTCCTTA
GAAGAGTATG CCAAACAGTT TGGTTTTGAG TATAAGCCCA CCGGCAACTA G
 
Protein sequence
MKDLVQDIFE KKDAQLGINQ SLKAQLQTIY TTDQQPRSRI DSLIRVYGQN SPQLQQLWQS 
IHREDSINLV KIEQIIRQYG YPGRRLVGAK LANTAWLIIQ HSPLAIQEKY FPLIEQAANQ
EEMSKTNMAL LIDRIRVYKG QNQLYGTQVK IESTGQKSFY PIEDQKNVNK RRSQVGLDSL
EEYAKQFGFE YKPTGN