Gene Slin_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3627 
Symbol 
ID8727380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4384192 
End bp4384800 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388433 
Protein GI284038503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.570634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACGA ATCGTTTTCT ACTTCTCCTT ATTTTAGTGA CTTCTCCCCT GCTCACGCGG 
GCTCAAAGTG ATAAACCTGT TGGCGGCCAT TTTGGCGTAA AAATAGGGGC TTCGTTTACG
CAGGTAGCCA TCTCCGGAAC CAGCGTAAAC ATTCCCAAGC GGGCTCTACA GCCAAATTTA
GGCGTCATGT ACCGGTATCG GTATCACCGA GTGGTACTTC AGCCGGAAGC CTTGCTGGCC
ATTAAAGGTG GTACGTTCCA GCAGGAAGCC GTTGGTGGTC GAACCACAAC CAGTAATTCG
TATTACTACG CCTGCCTGCC CATTCTGCTT GGCTACATAC CCACCGAAGG CTTAACGCTT
CAGGCCGGAC CGGAATTCAG TTACGCCCTC AACTCAGGCT CTACCAGCGG CCCCGGTGCG
CAAAACGACC TGGGTGCTGT TGTTGGCGTG CACTACGATT TTCTGGACAT GCTGAGCAAA
ATGAGCTTGC ACCTGCGTTA TGTACACGGA TTTGTGAACG TGTCGCCGGA AGCGGGCGCA
ACGTATTACA ACCGCAACGT TCAGGTATCG ATCGTTTATA ATCTGTATCC CAAGAAGAAA
AAGAAATAA
 
Protein sequence
MYTNRFLLLL ILVTSPLLTR AQSDKPVGGH FGVKIGASFT QVAISGTSVN IPKRALQPNL 
GVMYRYRYHR VVLQPEALLA IKGGTFQQEA VGGRTTTSNS YYYACLPILL GYIPTEGLTL
QAGPEFSYAL NSGSTSGPGA QNDLGAVVGV HYDFLDMLSK MSLHLRYVHG FVNVSPEAGA
TYYNRNVQVS IVYNLYPKKK KK