Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3627 |
Symbol | |
ID | 8727380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4384192 |
End bp | 4384800 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388433 |
Protein GI | 284038503 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.570634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACGA ATCGTTTTCT ACTTCTCCTT ATTTTAGTGA CTTCTCCCCT GCTCACGCGG GCTCAAAGTG ATAAACCTGT TGGCGGCCAT TTTGGCGTAA AAATAGGGGC TTCGTTTACG CAGGTAGCCA TCTCCGGAAC CAGCGTAAAC ATTCCCAAGC GGGCTCTACA GCCAAATTTA GGCGTCATGT ACCGGTATCG GTATCACCGA GTGGTACTTC AGCCGGAAGC CTTGCTGGCC ATTAAAGGTG GTACGTTCCA GCAGGAAGCC GTTGGTGGTC GAACCACAAC CAGTAATTCG TATTACTACG CCTGCCTGCC CATTCTGCTT GGCTACATAC CCACCGAAGG CTTAACGCTT CAGGCCGGAC CGGAATTCAG TTACGCCCTC AACTCAGGCT CTACCAGCGG CCCCGGTGCG CAAAACGACC TGGGTGCTGT TGTTGGCGTG CACTACGATT TTCTGGACAT GCTGAGCAAA ATGAGCTTGC ACCTGCGTTA TGTACACGGA TTTGTGAACG TGTCGCCGGA AGCGGGCGCA ACGTATTACA ACCGCAACGT TCAGGTATCG ATCGTTTATA ATCTGTATCC CAAGAAGAAA AAGAAATAA
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Protein sequence | MYTNRFLLLL ILVTSPLLTR AQSDKPVGGH FGVKIGASFT QVAISGTSVN IPKRALQPNL GVMYRYRYHR VVLQPEALLA IKGGTFQQEA VGGRTTTSNS YYYACLPILL GYIPTEGLTL QAGPEFSYAL NSGSTSGPGA QNDLGAVVGV HYDFLDMLSK MSLHLRYVHG FVNVSPEAGA TYYNRNVQVS IVYNLYPKKK KK
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