Gene Slin_3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3610 
Symbol 
ID8727363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4365280 
End bp4365747 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content53% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003388416 
Protein GI284038486 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.108072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.729996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAA TAGCTTATCA GGACGAATTA CTCTTTACAT CCACGCAGCA AAGAGGCAGT 
AGCGGACCCG ACGTTCGTCG AATACAGGAA TGGCTTTGCC TGAACGCGCT CCGATACCCG
ACAGCCGCCC TGACCACAAC ACTCGATGGT GAGTTTGGCC CGGCAACAAA ACTGGCGGTG
CAGAATTTCC AGGCCGTCCT CAAGCTCCCT AAAACCGGAG TTGTCACACC CGATTTATTC
GCGAAGCTAA GCGCCCCGCT GGCAACGGGT TTTCAAACCA AACCAGCGAG TAAAGACATT
CGGAGAGCCG TTGTGCAACT GGCACAAACC CATTTAAAAC AACGCTCCGC TGAATTGCAA
TGCGACGACG GGCAAAATCT TGGCCCCTGG GTCCGTAGCT ATTGTGATGG GTTAGACGGC
TCGCTTTTCA AGTGGTGTGC CGGTTTTGTC CAGTCTATTC TGGACTAG
 
Protein sequence
MLKIAYQDEL LFTSTQQRGS SGPDVRRIQE WLCLNALRYP TAALTTTLDG EFGPATKLAV 
QNFQAVLKLP KTGVVTPDLF AKLSAPLATG FQTKPASKDI RRAVVQLAQT HLKQRSAELQ
CDDGQNLGPW VRSYCDGLDG SLFKWCAGFV QSILD