Gene Slin_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3546 
Symbol 
ID8727299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4277746 
End bp4278882 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content53% 
IMG OID 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_003388352 
Protein GI284038422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTT TGCTACTTAT CCTGCTGTTC CTGTTCACGG TATATTCTGT AAAAGCCCAA 
TCCGCTGCCG ACTGGCTTCG GCTTCGTCGG TATGCTACGG ACATCGGTGT TGACAGCCTG
TGCCACACGC CCGACGCCCC CTGCCTGAAG CAGTATTTTA CGCAGATCGT TTACGGGCGA
ACACCCCGCC ATGTGGGCTA TCAGGGCGTT CCGGAGTCGA TGGATACGCT CCGATTAAAC
CGGCTTACCC GGCAGTTTAT AGCTGGTTCT GACTGGTGTC CATTGCTGGA TTCGCTCGAA
TCGCCGGATC GAAGCTACCG GCAGTTGAAA GAATATTGCA TGCGCTGCCT GATCGATGAT
TATATGTCCG ACTCCCTCAC AATCGAACAG GTTCAGGAAA CACTCAATAC GTACCGGTGG
CTCAACCGAT TCCGCAACAG CAAACGTATT GTTGTCAATA TACCATCGGC CACGCTCCGG
GTTATCGACC GGCAGGGGAA AACGCTGCTC AACAGCCGGG TAGTCGTTGG CAAAGCAGAT
ACGCCAACGC CCCTGTTTAC GGCGTTCATT CCTAGTCTGG TCATGTACCC CTACTGGAAT
GTACCCCGCT CCATTATGGT TAAAGAAATG CTGCCCAGGA TTCAGAAGAA CCCGGCTCTG
GTGCTAAGCT TCCTGAACTT GGATGTTATT GATGCCAAAG GGCAGGTGGT AGACCCAAAA
ACGGTAAACT GGTCGGTTTC CGCATCGGCC GTTTACAACG GTTCATTCCC CTACCGACTC
CGGCAGGCGA CCGGTTGCGC CAATGCCCTG GGTGTACTGA AGTTCAACGT AAACAGTCCT
TACGATGTAT ACCTGCACGA TACCAACGCC CGGCATGCCT TTGCCAGCGA AAACCGTCAG
TTGAGTCACG GCTGCATTCG GGTTGAGAAA CCAGCCGAAC TGGCCAATCT GCTGCTGGGC
TATACTCGTT TCAGCGACGA CTACCTGACA AGCTGCCCTA AAAATGCCAG CCCTAAAACG
GTTCAGTTAC CCGTATCAGT ACCTGTTATT ACAACCTATA ATGTGCTGGA CATCGACGCA
GCGGGGGCTA TTCAGGTTTA CCCCGACGTG TACGGAAAAT GGCGACTGGC GCTGTAG
 
Protein sequence
MSRLLLILLF LFTVYSVKAQ SAADWLRLRR YATDIGVDSL CHTPDAPCLK QYFTQIVYGR 
TPRHVGYQGV PESMDTLRLN RLTRQFIAGS DWCPLLDSLE SPDRSYRQLK EYCMRCLIDD
YMSDSLTIEQ VQETLNTYRW LNRFRNSKRI VVNIPSATLR VIDRQGKTLL NSRVVVGKAD
TPTPLFTAFI PSLVMYPYWN VPRSIMVKEM LPRIQKNPAL VLSFLNLDVI DAKGQVVDPK
TVNWSVSASA VYNGSFPYRL RQATGCANAL GVLKFNVNSP YDVYLHDTNA RHAFASENRQ
LSHGCIRVEK PAELANLLLG YTRFSDDYLT SCPKNASPKT VQLPVSVPVI TTYNVLDIDA
AGAIQVYPDV YGKWRLAL