Gene Slin_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3530 
Symbol 
ID8727283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4264170 
End bp4264916 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content49% 
IMG OID 
Productprotein of unknown function DUF152 
Protein accessionYP_003388336 
Protein GI284038406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGC ATTACAGTCC AGCTATATTT TCTTCATTCA CTACCCTGAT TGCCGCCGAA 
AGCACCCGGG TTGGGGGTGT TAGCCCGGTG CCATTTTCAT CGCTCAATCT GGGTATCAAC
ACCGCCGATG AGGTTGCGAA TGTTGATGAG AACCGCCGGC GCTTCTTTTC GGACATTGGT
GCCGGTTCAT TTCAGTTTGC ATCGTCACAT CAGATTCATG GCACAGCCGT TCTACACGCA
ACTGAGCCGG GTCGTTTTGA TGGCTATGAT GCGCTGATCA CCAACCGGCC TAATCTGCTC
ATCGGCGTAA CCGTAGCCGA CTGCGTACCG ATTTTGCTGT ATGACCATCG GCATCAGGCT
GTTGGAGCGG TTCATGCGGG CTGGCGCGGT ACCGTGGGTG GTATTGTTAC CAAAACACTC
GAAGCCATGC AGGCCCAATT TAGCACATTG CCCGAAGACT GTTATGGCTA TATAGGAACG
TGCATTGATG AATGCGCTTT TGAGGTTGGT CCTGAAGTAG CCGAACAGTT TTTGCCAGCT
TTTAAACGGG CAGACCATAA CAGCGGAAAA AGTTATATTG ACTTAAAAGC AGCCAATTTG
CAGCTACTGA CCGACTTTGG AGTTCCTGAA AACCAGATAA GTATTTCCCC CTTCTCGACG
GTGCTGAATA ATGACCTCTA TTTCTCGTAT CGGGCAGAAG GCGGACATAC TGGACGAATG
TTAGCTGTAA TTGGTATAAA ACAATAA
 
Protein sequence
MKSHYSPAIF SSFTTLIAAE STRVGGVSPV PFSSLNLGIN TADEVANVDE NRRRFFSDIG 
AGSFQFASSH QIHGTAVLHA TEPGRFDGYD ALITNRPNLL IGVTVADCVP ILLYDHRHQA
VGAVHAGWRG TVGGIVTKTL EAMQAQFSTL PEDCYGYIGT CIDECAFEVG PEVAEQFLPA
FKRADHNSGK SYIDLKAANL QLLTDFGVPE NQISISPFST VLNNDLYFSY RAEGGHTGRM
LAVIGIKQ