Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3530 |
Symbol | |
ID | 8727283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4264170 |
End bp | 4264916 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | protein of unknown function DUF152 |
Protein accession | YP_003388336 |
Protein GI | 284038406 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGC ATTACAGTCC AGCTATATTT TCTTCATTCA CTACCCTGAT TGCCGCCGAA AGCACCCGGG TTGGGGGTGT TAGCCCGGTG CCATTTTCAT CGCTCAATCT GGGTATCAAC ACCGCCGATG AGGTTGCGAA TGTTGATGAG AACCGCCGGC GCTTCTTTTC GGACATTGGT GCCGGTTCAT TTCAGTTTGC ATCGTCACAT CAGATTCATG GCACAGCCGT TCTACACGCA ACTGAGCCGG GTCGTTTTGA TGGCTATGAT GCGCTGATCA CCAACCGGCC TAATCTGCTC ATCGGCGTAA CCGTAGCCGA CTGCGTACCG ATTTTGCTGT ATGACCATCG GCATCAGGCT GTTGGAGCGG TTCATGCGGG CTGGCGCGGT ACCGTGGGTG GTATTGTTAC CAAAACACTC GAAGCCATGC AGGCCCAATT TAGCACATTG CCCGAAGACT GTTATGGCTA TATAGGAACG TGCATTGATG AATGCGCTTT TGAGGTTGGT CCTGAAGTAG CCGAACAGTT TTTGCCAGCT TTTAAACGGG CAGACCATAA CAGCGGAAAA AGTTATATTG ACTTAAAAGC AGCCAATTTG CAGCTACTGA CCGACTTTGG AGTTCCTGAA AACCAGATAA GTATTTCCCC CTTCTCGACG GTGCTGAATA ATGACCTCTA TTTCTCGTAT CGGGCAGAAG GCGGACATAC TGGACGAATG TTAGCTGTAA TTGGTATAAA ACAATAA
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Protein sequence | MKSHYSPAIF SSFTTLIAAE STRVGGVSPV PFSSLNLGIN TADEVANVDE NRRRFFSDIG AGSFQFASSH QIHGTAVLHA TEPGRFDGYD ALITNRPNLL IGVTVADCVP ILLYDHRHQA VGAVHAGWRG TVGGIVTKTL EAMQAQFSTL PEDCYGYIGT CIDECAFEVG PEVAEQFLPA FKRADHNSGK SYIDLKAANL QLLTDFGVPE NQISISPFST VLNNDLYFSY RAEGGHTGRM LAVIGIKQ
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