Gene Slin_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3523 
Symbol 
ID8727276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4257729 
End bp4258160 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content49% 
IMG OID 
ProductTonB family protein 
Protein accessionYP_003388329 
Protein GI284038399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.661805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.93961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAC ATTCACTCAA AGCGGCCTGC GTTCTGGGCC TGTCACTTTC CTTTTTCCTG 
GTTAACACGG GCCTTGCTCA ATCATCGGCG GCCAGGATAG AAGTCGATTT AAATCCACCC
GCCGAGTTGA ATCCACTAAT CCAGCCCGAG TTTCCGGGAG GTTTCGGTAC TCTAAATACG
TATTTAAAGG AAAACGTCCG TTACCCCGCA GCGGCAGCAC AAGCCAACAT TAAAGGCTTT
GTACTCATAT CCTATCTGAT TGATGAATTG GGTAATGTAA CAGCAATTAA GGTTATGAAA
GGACTTGGTT ATGGCTGTGA TGAAGAAGCC TTACGCGTTG TCAGGCAAAT GCCCCGCTGG
AAGCCCGCTC AACAATCGGG GAAAGCCACA CCGGTGAAGT ATAACCTCCC GGTTCATTTT
CCACCCAACT GA
 
Protein sequence
MRKHSLKAAC VLGLSLSFFL VNTGLAQSSA ARIEVDLNPP AELNPLIQPE FPGGFGTLNT 
YLKENVRYPA AAAQANIKGF VLISYLIDEL GNVTAIKVMK GLGYGCDEEA LRVVRQMPRW
KPAQQSGKAT PVKYNLPVHF PPN