Gene Slin_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3460 
Symbol 
ID8727213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4193616 
End bp4194392 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content50% 
IMG OID 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003388267 
Protein GI284038337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG ACATCACGAC CGAAACGCTG CCCCAACTTC TCAATCGTTA CCGGAACACA 
ACGGAGAAAC TAACGAACTA TGGGTTCAAT AACCATAGCC TGCATACATA TCATTCCACT
GCCCTTGAAG GCTGCCAGGT ATCGTTTCAA CAAACCCAGG CGCTGCTGAC TGATAGCAAG
TTACGTTCTG AACTACTCAC TGCCGATCAG TTTCTGGTTA TCGATTACCA TAAGGCTTTC
GAGGAGGTGT TAGCGATGGC CAGCCAGCAA GAGCCTATAA ACCGGCTTTC CATCCAACGA
ATAGCGTCGG TTTTAATGCA CCAAACGGGT GGTCTGAAGC ATTCGCTCTT GAGCAGTTTT
GACACGAGTA AAGGTGAGTT GCGCATCGAT AGCGCCATGG CAGGCAGACG GCAACTGGTG
GAGGCCCATA AACTGCCTGC CGCCCTCGAT GCCCTGTTTC GAGAAATCAA TACCGCCATT
GCCTTGTTCA AAACTCCGCG TCAACTCTAT GATTTGTCGT TTAAAGCGCA CTTTGACCTG
CTAACTCTGC ATCCATTCGG AGCGGGCAAT GGCCTTATGG CGCGGTTACT CATGAGTTAT
ATTCAGCATT ACCATCAACT GCCGCTCAGC CTGGTTTACG CCGATAGCCG AACAGCTTAT
CTAAAGTCGC TGGATGCGAG CTGGCAACAA AAAGCACCCG TACCAATTAT CAGCTTCATG
CACAGCCAAC TCAGCCGTTT TCTACAGGAA GAGATTAGTA GTAGAAGCGA GGAGTGA
 
Protein sequence
MKADITTETL PQLLNRYRNT TEKLTNYGFN NHSLHTYHST ALEGCQVSFQ QTQALLTDSK 
LRSELLTADQ FLVIDYHKAF EEVLAMASQQ EPINRLSIQR IASVLMHQTG GLKHSLLSSF
DTSKGELRID SAMAGRRQLV EAHKLPAALD ALFREINTAI ALFKTPRQLY DLSFKAHFDL
LTLHPFGAGN GLMARLLMSY IQHYHQLPLS LVYADSRTAY LKSLDASWQQ KAPVPIISFM
HSQLSRFLQE EISSRSEE