Gene Slin_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3455 
Symbol 
ID8727208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4186867 
End bp4187679 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388262 
Protein GI284038332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCC AAGCAAAATT CATCGCCCTT GCCTTATGTC TAACAATTGC AGCCTCTCCA 
TTGGCTCATG CACAAAACCC CGACGCCCCA CTTCCTGTAC CGGGCGATCG GGCTATGTCT
ATGAGGGGGC AGGATCGAGA CCAGCGCCGA CCGGACGGCC CCGGGCGCAA ATACGGCAAA
CCCGGTGCTG GCCGTGATGG TAGAGAGTTC GGGCAAGGCC CCGGCCGGAA CCACCATTCT
GGCGGCTTAA CCTCACTGAC TACAGTTTCG GGAACGGTTG GCCAGTTGCT CGGAAACGAC
GATGCTATCC TGGATGGTTT CACGCTCAAC ACGGGTTCCG GGCAAGCCAC AACCGTTAAA
TTCCCGCCCC ATCTGGGTGA GCAGGTGCAG AAAGCCGTCA AGGCGGGCAG CACAGTAAGC
GTAAGTGGGT TTACGGATAA GACGCCCACC GGGGAATCAC TCTTTCGGAT GAATAGCCTG
ACGATTGGAA AAACAACTGT TTTGGATGCG CCACCGGTTC GGCCAGTTAC ACCGCCAGCT
CCACCGGAAG TAACAACCGT AACGGGTAAA ATAGCCGATT ATCGACTGGA TCGGGGCGGA
CGTGTTAATG CGTTGGTGCT CGACAATAAA ACGGTGGTTA GTATTCCGGC CCATGTTGCG
TACCAACTGA CCGATCTGGC TAAAAAAGGG AATACCATTA CCGTGCAGGG CTATCCGAAG
CAGATTCGCG CCGGGCAGAT TCAGCTGGAA AAAGTGAACG TGATACGCGC TTCGGTACTG
ACAATCAATG GACAGCAGTA TTTGGTACGG TAA
 
Protein sequence
METQAKFIAL ALCLTIAASP LAHAQNPDAP LPVPGDRAMS MRGQDRDQRR PDGPGRKYGK 
PGAGRDGREF GQGPGRNHHS GGLTSLTTVS GTVGQLLGND DAILDGFTLN TGSGQATTVK
FPPHLGEQVQ KAVKAGSTVS VSGFTDKTPT GESLFRMNSL TIGKTTVLDA PPVRPVTPPA
PPEVTTVTGK IADYRLDRGG RVNALVLDNK TVVSIPAHVA YQLTDLAKKG NTITVQGYPK
QIRAGQIQLE KVNVIRASVL TINGQQYLVR