Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3455 |
Symbol | |
ID | 8727208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4186867 |
End bp | 4187679 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388262 |
Protein GI | 284038332 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCC AAGCAAAATT CATCGCCCTT GCCTTATGTC TAACAATTGC AGCCTCTCCA TTGGCTCATG CACAAAACCC CGACGCCCCA CTTCCTGTAC CGGGCGATCG GGCTATGTCT ATGAGGGGGC AGGATCGAGA CCAGCGCCGA CCGGACGGCC CCGGGCGCAA ATACGGCAAA CCCGGTGCTG GCCGTGATGG TAGAGAGTTC GGGCAAGGCC CCGGCCGGAA CCACCATTCT GGCGGCTTAA CCTCACTGAC TACAGTTTCG GGAACGGTTG GCCAGTTGCT CGGAAACGAC GATGCTATCC TGGATGGTTT CACGCTCAAC ACGGGTTCCG GGCAAGCCAC AACCGTTAAA TTCCCGCCCC ATCTGGGTGA GCAGGTGCAG AAAGCCGTCA AGGCGGGCAG CACAGTAAGC GTAAGTGGGT TTACGGATAA GACGCCCACC GGGGAATCAC TCTTTCGGAT GAATAGCCTG ACGATTGGAA AAACAACTGT TTTGGATGCG CCACCGGTTC GGCCAGTTAC ACCGCCAGCT CCACCGGAAG TAACAACCGT AACGGGTAAA ATAGCCGATT ATCGACTGGA TCGGGGCGGA CGTGTTAATG CGTTGGTGCT CGACAATAAA ACGGTGGTTA GTATTCCGGC CCATGTTGCG TACCAACTGA CCGATCTGGC TAAAAAAGGG AATACCATTA CCGTGCAGGG CTATCCGAAG CAGATTCGCG CCGGGCAGAT TCAGCTGGAA AAAGTGAACG TGATACGCGC TTCGGTACTG ACAATCAATG GACAGCAGTA TTTGGTACGG TAA
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Protein sequence | METQAKFIAL ALCLTIAASP LAHAQNPDAP LPVPGDRAMS MRGQDRDQRR PDGPGRKYGK PGAGRDGREF GQGPGRNHHS GGLTSLTTVS GTVGQLLGND DAILDGFTLN TGSGQATTVK FPPHLGEQVQ KAVKAGSTVS VSGFTDKTPT GESLFRMNSL TIGKTTVLDA PPVRPVTPPA PPEVTTVTGK IADYRLDRGG RVNALVLDNK TVVSIPAHVA YQLTDLAKKG NTITVQGYPK QIRAGQIQLE KVNVIRASVL TINGQQYLVR
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