| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3432 |
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| Symbol | |
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| ID | 8727185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4160035 |
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| End bp | 4161087 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003388239 |
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| Protein GI | 284038309 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA TGAAAGGTCC GGGCATATTC TTAGCCCAGT TTCTAGGGGA CGCAGAGCCC
TTCAATAACC TGGAGTCCAT TGCCAAATAC ATGGCCGATC TCGGCTATAA AGGAATCCAG
ATTCCCACCT GGGACCCACG GATGATCGAC CTCAAGCAGG CTTCTGAAAG CCTGACCTAC
TGCGATGAGC TGAAAGGCAA GCTGAAGGAT ATCGGCGTCG AGATCACTGA ACTCGCCACG
CACCTTCAAG GTCAGTTAGT AGCGGTACAT CCGGCCTACG GCCCTATGTT CGATGGCTTC
GGTCCGGCTG AACTGGCGGG CAAGCCCAAA GAACAGCAGG CATGGGCGGT CGATCAGCTG
CTGATGACGG CCAAAGCCAG TAAGAATCTG GGCCTGGTGG CTAGTCCTAC TTTTTCGGGC
GCGCTGCTAT GGCCATTCGT ATATCCCTGG CCACAGCGTC CGGCGGGTCT GGTCGAAACG
GGATTCAAAG AACTCGCCGA CCGCTGGCTA CCCATCCTGA ACGCCTATGA CGAAGCCGGG
GTCGATGTGG CGTATGAGCT TCACCCCGGC GAGGATTTGC ACGACGGTAT CACCTTCGAG
ATGTTCCTGG AGAAAGTGGG TAACCACCCC CGCGCCGGTA TCAACTACGA CCCAAGCCAC
TTTGTATTGC AACAGCTTGA TTATTTGCAG TTCATCGACT TCTACCACGA CCGTATTTTC
GCCTACCACG TGAAAGACGC CGAGTTTAAC CCAACGGGTA AGCAGGGCGT CTATGGTGGC
TATCAGGGCT GGGTAGAGCG GGCCGGACGC TTCCGTTCGC TGGGCGACGG TCAGGTTGAC
TTCGCGGGGA TCTTCTCCAA ACTGGCTCAG TACGACTATG ACCGGTGGGC TGTGCTTGAG
TGGGAGTGCG CCATCAAACA CCCCGAACAG GGGGCTGCCG AAGGGGCTCC GTTCATTTCG
GATCATATCA TCCGCGTGAC CGAACGCGCT TTCGACGACT TCGCCGGAAC CGGTGCTGAT
GACGCATTCA ATAAGAAAGT ACTAGGGTTG TAA
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| Protein sequence | MKTMKGPGIF LAQFLGDAEP FNNLESIAKY MADLGYKGIQ IPTWDPRMID LKQASESLTY
CDELKGKLKD IGVEITELAT HLQGQLVAVH PAYGPMFDGF GPAELAGKPK EQQAWAVDQL
LMTAKASKNL GLVASPTFSG ALLWPFVYPW PQRPAGLVET GFKELADRWL PILNAYDEAG
VDVAYELHPG EDLHDGITFE MFLEKVGNHP RAGINYDPSH FVLQQLDYLQ FIDFYHDRIF
AYHVKDAEFN PTGKQGVYGG YQGWVERAGR FRSLGDGQVD FAGIFSKLAQ YDYDRWAVLE
WECAIKHPEQ GAAEGAPFIS DHIIRVTERA FDDFAGTGAD DAFNKKVLGL
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