Gene Slin_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3382 
Symbol 
ID8727135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4087131 
End bp4087793 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388189 
Protein GI284038259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.704087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.4967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA AAGCAATTAT AACCGGTGCT ACGGGCATGG TAGGCGAAGG CGTCCTGCAC 
GAATGTTTAC AGCAACCCGA GGTAGAAGCG GTACTGCTCA TCAACCGCAA CCCCAGTGGT
GTATCGCACC CAAAAGTCAG CGAGATTATT CACAAAGATT TCTTCGATCT GTCGTCCATC
GAATCGCAAC TGAGCGGGTA CAACGCCTGC TTTTTCTGCC TGGGGGTATC GTCGGTAGGA
ATGAAGGAGG ACGAATACCG GCACCTGACC TACGACCTGA CGCTACACGT AGCCGAAACG
CTGGCCCGGC TCAATCCCGA TATGACCTTT GGTTATATCT CGGGCGCAGG AACCGACAGC
ACCGAACAGG GACGCAGCAT GTGGGCGCGG GTGAAAGGTG CTACCGAGAA TGCCCTGATG
CGGCTGCCGT TCAAGAAAGC GTATATGTTT CGGCCGGGCT TCATGAAACC AACCCCCGGT
CTGAAAAACA CGCTGGTCTA TTATAAATAC ATCAACTGGC TGTATCCTAT CGGCCGGGCG
CTTTACCCGG CGGGCTTTTC AACCTTGCAG GAACTGGCGC TGGCCATGAT AAAGTCGGTC
AGTGTTGGCT ATGAAAAGTC AATTCTGGAA GTAAAGGATA TTGTCGATCT GGCAAAGCGG
TAG
 
Protein sequence
MKIKAIITGA TGMVGEGVLH ECLQQPEVEA VLLINRNPSG VSHPKVSEII HKDFFDLSSI 
ESQLSGYNAC FFCLGVSSVG MKEDEYRHLT YDLTLHVAET LARLNPDMTF GYISGAGTDS
TEQGRSMWAR VKGATENALM RLPFKKAYMF RPGFMKPTPG LKNTLVYYKY INWLYPIGRA
LYPAGFSTLQ ELALAMIKSV SVGYEKSILE VKDIVDLAKR