Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3327 |
Symbol | |
ID | 8727080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4023362 |
End bp | 4024648 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388136 |
Protein GI | 284038206 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.802157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.933717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTTAA TATACTTATA TGGTGAATTG TGTGACTTTG TGCGTATTCT GCGTAATACT ATAATCAGTT ACAAGCATAC CCCAAGAACG CATTTTATGA ACCCTTTTTC TATCTACACC GCTACCCTAC GCCAATGGTT ATTAATCGTT TCTTTTTTCG GGATACTGTC AGGGCCAGCT TATGGCCAGG TAATTTACCG CAATACGTTT ACGGGTACTG GAGACTGCCC TACTCAGGGA AATGTGCCAA TTATGTCGTC CAATGCAACA GGAACGGTGT TATCGAGGAG TAGTTCTCTA ACATGCGACA CTGGCGCAGA TGTTTTCAAC TCTAGAGGAA TCAATAATAC GGCAACCGTA AATGATGCTT CTTATATCGA GTTTTCAGTT ACGGCAAACC CTGGTGCTCA GTTGAACGTA ACGTCACTTA GCTTTTTACG GCAGGCCAGT GCAGCAGCAC CTAACCAGTT AGAAGTGCGC TATAGTACCA ATAATTTTAC AACATCGACG AGCTGGGGTG GTGCCCCACT TACACCTATT GTAGGGACTT CTGTTGCTAA TTCCACTATT ACCTGGGATT TTCCCGATTT CTCAGTGCCT CCGGGTACGA CATTGTCGTT TCGGTTTTAT CCGTATGGCA CCCAGCGGGC CGATTTAGCA GCAGGGGCAT CGAATGGGTC TGTCGGTACA TTCAGACTGG ATAATGTGAC GCTGAATGGG GCATCGCCTT TACCCGTCAA CTTGGTTTCA TTCACGGGCC AGTCCACCAA AAACGGCGTG ACGCTCAACT GGGTAACTGC CTGGGAGGAG GAAAATCAGG GCTTCGAGAT TCAGAAAAGC AGCAATGCAA AAAGCTTTGA AACGGTGGGC TCAGTGGAGG GTAAATACAA TGCGCAAGGG CAATCTGTTT ATGAGTTTAC AGATCAGAAT GTGATGCCCA GCCAGATTTA TTATTACCGG CTTAAGCAAA ACGACCGAAG TGGCGCGAGC GATTTGTCAA AAATCATTGC CGTGCGGGCA GATGATAATG TGCAGAAAGA CAAAGCGATT ATATTCCCTA ATCCGAACAT GGGACAGTTT ACTCTTTCCG GTTATGAATC AGTACCTGTT ACCATTACCT TGTATGGCCC TAGCGGTGGC GAAATCCCTA TAGAAACGGA AGAACGTAAA ACGCGTGAGC TTGATGTTCG GGCTCGTACA TTTCTGCCGC CTGGCTTGTA TTATCTCTAT ATAAAGCCCG CAGACTATAC AAAGACGGAA GTTCTGAAAG TGCTGATTGA GCCTTAG
|
Protein sequence | MILIYLYGEL CDFVRILRNT IISYKHTPRT HFMNPFSIYT ATLRQWLLIV SFFGILSGPA YGQVIYRNTF TGTGDCPTQG NVPIMSSNAT GTVLSRSSSL TCDTGADVFN SRGINNTATV NDASYIEFSV TANPGAQLNV TSLSFLRQAS AAAPNQLEVR YSTNNFTTST SWGGAPLTPI VGTSVANSTI TWDFPDFSVP PGTTLSFRFY PYGTQRADLA AGASNGSVGT FRLDNVTLNG ASPLPVNLVS FTGQSTKNGV TLNWVTAWEE ENQGFEIQKS SNAKSFETVG SVEGKYNAQG QSVYEFTDQN VMPSQIYYYR LKQNDRSGAS DLSKIIAVRA DDNVQKDKAI IFPNPNMGQF TLSGYESVPV TITLYGPSGG EIPIETEERK TRELDVRART FLPPGLYYLY IKPADYTKTE VLKVLIEP
|
| |