Gene Slin_3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3327 
Symbol 
ID8727080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4023362 
End bp4024648 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388136 
Protein GI284038206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.802157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.933717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTAA TATACTTATA TGGTGAATTG TGTGACTTTG TGCGTATTCT GCGTAATACT 
ATAATCAGTT ACAAGCATAC CCCAAGAACG CATTTTATGA ACCCTTTTTC TATCTACACC
GCTACCCTAC GCCAATGGTT ATTAATCGTT TCTTTTTTCG GGATACTGTC AGGGCCAGCT
TATGGCCAGG TAATTTACCG CAATACGTTT ACGGGTACTG GAGACTGCCC TACTCAGGGA
AATGTGCCAA TTATGTCGTC CAATGCAACA GGAACGGTGT TATCGAGGAG TAGTTCTCTA
ACATGCGACA CTGGCGCAGA TGTTTTCAAC TCTAGAGGAA TCAATAATAC GGCAACCGTA
AATGATGCTT CTTATATCGA GTTTTCAGTT ACGGCAAACC CTGGTGCTCA GTTGAACGTA
ACGTCACTTA GCTTTTTACG GCAGGCCAGT GCAGCAGCAC CTAACCAGTT AGAAGTGCGC
TATAGTACCA ATAATTTTAC AACATCGACG AGCTGGGGTG GTGCCCCACT TACACCTATT
GTAGGGACTT CTGTTGCTAA TTCCACTATT ACCTGGGATT TTCCCGATTT CTCAGTGCCT
CCGGGTACGA CATTGTCGTT TCGGTTTTAT CCGTATGGCA CCCAGCGGGC CGATTTAGCA
GCAGGGGCAT CGAATGGGTC TGTCGGTACA TTCAGACTGG ATAATGTGAC GCTGAATGGG
GCATCGCCTT TACCCGTCAA CTTGGTTTCA TTCACGGGCC AGTCCACCAA AAACGGCGTG
ACGCTCAACT GGGTAACTGC CTGGGAGGAG GAAAATCAGG GCTTCGAGAT TCAGAAAAGC
AGCAATGCAA AAAGCTTTGA AACGGTGGGC TCAGTGGAGG GTAAATACAA TGCGCAAGGG
CAATCTGTTT ATGAGTTTAC AGATCAGAAT GTGATGCCCA GCCAGATTTA TTATTACCGG
CTTAAGCAAA ACGACCGAAG TGGCGCGAGC GATTTGTCAA AAATCATTGC CGTGCGGGCA
GATGATAATG TGCAGAAAGA CAAAGCGATT ATATTCCCTA ATCCGAACAT GGGACAGTTT
ACTCTTTCCG GTTATGAATC AGTACCTGTT ACCATTACCT TGTATGGCCC TAGCGGTGGC
GAAATCCCTA TAGAAACGGA AGAACGTAAA ACGCGTGAGC TTGATGTTCG GGCTCGTACA
TTTCTGCCGC CTGGCTTGTA TTATCTCTAT ATAAAGCCCG CAGACTATAC AAAGACGGAA
GTTCTGAAAG TGCTGATTGA GCCTTAG
 
Protein sequence
MILIYLYGEL CDFVRILRNT IISYKHTPRT HFMNPFSIYT ATLRQWLLIV SFFGILSGPA 
YGQVIYRNTF TGTGDCPTQG NVPIMSSNAT GTVLSRSSSL TCDTGADVFN SRGINNTATV
NDASYIEFSV TANPGAQLNV TSLSFLRQAS AAAPNQLEVR YSTNNFTTST SWGGAPLTPI
VGTSVANSTI TWDFPDFSVP PGTTLSFRFY PYGTQRADLA AGASNGSVGT FRLDNVTLNG
ASPLPVNLVS FTGQSTKNGV TLNWVTAWEE ENQGFEIQKS SNAKSFETVG SVEGKYNAQG
QSVYEFTDQN VMPSQIYYYR LKQNDRSGAS DLSKIIAVRA DDNVQKDKAI IFPNPNMGQF
TLSGYESVPV TITLYGPSGG EIPIETEERK TRELDVRART FLPPGLYYLY IKPADYTKTE
VLKVLIEP